RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Slc10a1O08705 362 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Klrg1O88713 188 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Phkg1P07934 388 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Drd3P30728 446 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Atp6v1e1P50518 226 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Pcbp4P57724 403 aaKnown RBP20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Fpr-rs7Q71MR7 338 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tas2r107Q7M725 308 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Ldoc1Q7TPY9 151 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 IfnkQ7TSL0 199 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 A730061H03RikQ8BGD2 154 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Znf787Q8BIF9 381 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Acp7Q8BX37 438 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Vmn1r200Q8R281 312 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr676Q8VGZ9 317 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Q99K99 313 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Ubqln4Q99NB8 596 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Prps1Q9D7G0 318 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Ethe1Q9DCM0 254 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Zbtb25G3UW50 439 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vmn1r27K7N688 303 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Lsm2O35900 95 aaKnown RBP20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Igk-V19-17P01633 149 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 S100a9P31725 113 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Capza2P47754 286 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 BglapP86546 95 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Bglap2P86547 95 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Faap20Q3UN58 186 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr151Q60893 309 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Prtn3Q61096 254 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 BocQ6AZB0 1110 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 ShfQ8CG80 238 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Rln3Q8CHK2 141 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Fahd1Q8R0F8 227 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vmn1r193Q8R258 319 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ppil3Q9D6L8 161 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Q9DAS2 200 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 PmpcaQ9DC61 524 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Aldh9a1Q9JLJ2 494 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Spint2Q9WU03 252 aa20.58■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Gm42517A0A1Y7VLQ2 374 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Awat1A2ADU9 328 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vmn2r69G3XA45 850 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 FiglaO55208 194 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Capns1O88456 269 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Wnt4P22724 351 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tmprss11cQ1JRP2 431 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Pan3Q640Q5 837 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Znf182Q6P560 627 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 SynbQ8BI41 618 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Nsun3Q8CCT7 348 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hsd17b13Q8VCR2 304 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr998Q8VF76 314 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tmed10Q9D1D4 219 aaKnown RBP20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Cdc40Q9DC48 579 aaKnown RBP20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Mrps34Q9JIK9 218 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vstm2bQ9JME9 285 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Cxcl15Q9WVL7 167 aa20.57■□□□□ 0.88
Scn1b-201ENSMUST00000098548 MiipA2A7Y5 387 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Gm21904A8HG57 180 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Gm21866J3QMH4 180 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Socs1O35716 212 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Cox5aP12787 146 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vbp1P61759 196 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Fv1P70213 459 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ctf2P83714 204 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vgll3P85442 326 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ext1P97464 746 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ces2fQ08ED5 561 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 EgflamQ4VBE4 1017 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Clba1Q8BHN9 321 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Fam221aQ8C790 301 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Wdr37Q8CBE3 496 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr866Q8VFI7 312 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr283Q8VGU2 309 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 As3mtQ91WU5 376 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Mrpl43Q99N89 183 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ubqln2Q9QZM0 638 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Adam11Q9R1V4 773 aa20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Mecp2Q9Z2D6 484 aaKnown RBP20.56■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ces2gE9PV38 560 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 CenpaO35216 134 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Rnf13O54965 381 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Clcn7O70496 803 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Cst3P21460 140 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Clk1P22518 483 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Fxyd2Q04646 70 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Kbtbd8Q3UQV5 599 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Slc5a6Q5U4D8 634 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vmn1r208Q8R275 308 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Vmn1r28Q8R2C9 302 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr166Q8VGX2 312 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Cdca3Q99M54 266 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Krt88Q9CPR6 171 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Cdca4Q9CWM2 237 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Lyzl6Q9DA11 148 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Fank1Q9DAM9 344 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tor1aQ9ER39 333 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 ChrdQ9Z0E2 948 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Smim17A0A504 109 aa20.55■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms