Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Gm25239-201ENSMUST00000174915 86 ntBASIC34.65■■■■□ 3.14
Cdca3Q99M54 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Cdca3Q99M54 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cdca3Q99M54 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cdca3Q99M54 Gm24109-201ENSMUST00000175489 103 ntBASIC30.27■■■□□ 2.44
Cdca3Q99M54 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cdca3Q99M54 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
Cdca3Q99M54 Gm15042-201ENSMUST00000120212 883 ntBASIC29.92■■■□□ 2.38
Cdca3Q99M54 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Cdca3Q99M54 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cdca3Q99M54 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cdca3Q99M54 Gm15045-201ENSMUST00000117359 883 ntBASIC29.1■■■□□ 2.25
Cdca3Q99M54 Psd-208ENSMUST00000224556 2034 ntBASIC29.01■■■□□ 2.24
Cdca3Q99M54 Gm23366-201ENSMUST00000175022 89 ntBASIC28.93■■■□□ 2.22
Cdca3Q99M54 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cdca3Q99M54 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Cdca3Q99M54 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.35■■■□□ 2.13
Cdca3Q99M54 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cdca3Q99M54 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cdca3Q99M54 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.1
Cdca3Q99M54 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cdca3Q99M54 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.02■■■□□ 2.08
Cdca3Q99M54 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Cdca3Q99M54 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.95■■■□□ 2.06
Cdca3Q99M54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cdca3Q99M54 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Cdca3Q99M54 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Cdca3Q99M54 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cdca3Q99M54 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cdca3Q99M54 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Cdca3Q99M54 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Cdca3Q99M54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.57■■■□□ 2
Cdca3Q99M54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cdca3Q99M54 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Cdca3Q99M54 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cdca3Q99M54 Gm25238-201ENSMUST00000174914 89 ntBASIC27.44■■□□□ 1.98
Cdca3Q99M54 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cdca3Q99M54 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cdca3Q99M54 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cdca3Q99M54 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cdca3Q99M54 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cdca3Q99M54 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.15■■□□□ 1.94
Cdca3Q99M54 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cdca3Q99M54 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cdca3Q99M54 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.97■■□□□ 1.91
Cdca3Q99M54 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Cdca3Q99M54 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
Cdca3Q99M54 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cdca3Q99M54 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Cdca3Q99M54 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cdca3Q99M54 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cdca3Q99M54 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cdca3Q99M54 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Cdca3Q99M54 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cdca3Q99M54 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.62■■□□□ 1.85
Cdca3Q99M54 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Cdca3Q99M54 Gm25262-201ENSMUST00000174934 133 ntBASIC26.58■■□□□ 1.85
Cdca3Q99M54 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.55■■□□□ 1.84
Cdca3Q99M54 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.53■■□□□ 1.84
Cdca3Q99M54 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.51■■□□□ 1.83
Cdca3Q99M54 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.47■■□□□ 1.83
Cdca3Q99M54 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cdca3Q99M54 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdca3Q99M54 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdca3Q99M54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.32■■□□□ 1.8
Cdca3Q99M54 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cdca3Q99M54 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.15■■□□□ 1.78
Cdca3Q99M54 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.14■■□□□ 1.78
Cdca3Q99M54 Gm27325-201ENSMUST00000175467 74 ntBASIC26.1■■□□□ 1.77
Cdca3Q99M54 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
Cdca3Q99M54 Gm26115-201ENSMUST00000175605 87 ntBASIC26.09■■□□□ 1.77
Cdca3Q99M54 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cdca3Q99M54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cdca3Q99M54 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cdca3Q99M54 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Cdca3Q99M54 Rab21-202ENSMUST00000218831 843 ntBASIC25.93■■□□□ 1.74
Cdca3Q99M54 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.93■■□□□ 1.74
Cdca3Q99M54 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.92■■□□□ 1.74
Cdca3Q99M54 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Cdca3Q99M54 Gm8109-201ENSMUST00000194076 746 ntBASIC25.86■■□□□ 1.73
Cdca3Q99M54 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cdca3Q99M54 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cdca3Q99M54 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cdca3Q99M54 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cdca3Q99M54 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.78■■□□□ 1.72
Cdca3Q99M54 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cdca3Q99M54 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cdca3Q99M54 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cdca3Q99M54 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.69■■□□□ 1.7
Cdca3Q99M54 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Cdca3Q99M54 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cdca3Q99M54 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cdca3Q99M54 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cdca3Q99M54 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cdca3Q99M54 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdca3Q99M54 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdca3Q99M54 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdca3Q99M54 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Cdca3Q99M54 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdca3Q99M54 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 169.3 ms