Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Gm25239-201ENSMUST00000174915 86 ntBASIC34.65■■■■□ 3.14
Cdca3Q99M54 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Cdca3Q99M54 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cdca3Q99M54 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cdca3Q99M54 Gm24109-201ENSMUST00000175489 103 ntBASIC30.27■■■□□ 2.44
Cdca3Q99M54 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cdca3Q99M54 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
Cdca3Q99M54 Gm15042-201ENSMUST00000120212 883 ntBASIC29.92■■■□□ 2.38
Cdca3Q99M54 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Cdca3Q99M54 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cdca3Q99M54 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cdca3Q99M54 Gm15045-201ENSMUST00000117359 883 ntBASIC29.1■■■□□ 2.25
Cdca3Q99M54 Psd-208ENSMUST00000224556 2034 ntBASIC29.01■■■□□ 2.24
Cdca3Q99M54 Gm23366-201ENSMUST00000175022 89 ntBASIC28.93■■■□□ 2.22
Cdca3Q99M54 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cdca3Q99M54 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Cdca3Q99M54 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.35■■■□□ 2.13
Cdca3Q99M54 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cdca3Q99M54 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cdca3Q99M54 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.1
Cdca3Q99M54 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cdca3Q99M54 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.02■■■□□ 2.08
Cdca3Q99M54 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Cdca3Q99M54 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.95■■■□□ 2.06
Cdca3Q99M54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cdca3Q99M54 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Cdca3Q99M54 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Cdca3Q99M54 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cdca3Q99M54 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cdca3Q99M54 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Cdca3Q99M54 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Cdca3Q99M54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.57■■■□□ 2
Cdca3Q99M54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cdca3Q99M54 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Cdca3Q99M54 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cdca3Q99M54 Gm25238-201ENSMUST00000174914 89 ntBASIC27.44■■□□□ 1.98
Cdca3Q99M54 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cdca3Q99M54 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cdca3Q99M54 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cdca3Q99M54 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cdca3Q99M54 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cdca3Q99M54 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.15■■□□□ 1.94
Cdca3Q99M54 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cdca3Q99M54 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cdca3Q99M54 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.97■■□□□ 1.91
Cdca3Q99M54 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Cdca3Q99M54 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
Cdca3Q99M54 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cdca3Q99M54 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Cdca3Q99M54 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cdca3Q99M54 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cdca3Q99M54 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cdca3Q99M54 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Cdca3Q99M54 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cdca3Q99M54 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.62■■□□□ 1.85
Cdca3Q99M54 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Cdca3Q99M54 Gm25262-201ENSMUST00000174934 133 ntBASIC26.58■■□□□ 1.85
Cdca3Q99M54 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.55■■□□□ 1.84
Cdca3Q99M54 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.53■■□□□ 1.84
Cdca3Q99M54 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.51■■□□□ 1.83
Cdca3Q99M54 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.47■■□□□ 1.83
Cdca3Q99M54 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cdca3Q99M54 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdca3Q99M54 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdca3Q99M54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.32■■□□□ 1.8
Cdca3Q99M54 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cdca3Q99M54 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.15■■□□□ 1.78
Cdca3Q99M54 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.14■■□□□ 1.78
Cdca3Q99M54 Gm27325-201ENSMUST00000175467 74 ntBASIC26.1■■□□□ 1.77
Cdca3Q99M54 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
Cdca3Q99M54 Gm26115-201ENSMUST00000175605 87 ntBASIC26.09■■□□□ 1.77
Cdca3Q99M54 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cdca3Q99M54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cdca3Q99M54 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cdca3Q99M54 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Cdca3Q99M54 Rab21-202ENSMUST00000218831 843 ntBASIC25.93■■□□□ 1.74
Cdca3Q99M54 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.93■■□□□ 1.74
Cdca3Q99M54 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.92■■□□□ 1.74
Cdca3Q99M54 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Cdca3Q99M54 Gm8109-201ENSMUST00000194076 746 ntBASIC25.86■■□□□ 1.73
Cdca3Q99M54 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cdca3Q99M54 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cdca3Q99M54 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cdca3Q99M54 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cdca3Q99M54 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.78■■□□□ 1.72
Cdca3Q99M54 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cdca3Q99M54 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cdca3Q99M54 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cdca3Q99M54 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.69■■□□□ 1.7
Cdca3Q99M54 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Cdca3Q99M54 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cdca3Q99M54 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cdca3Q99M54 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cdca3Q99M54 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cdca3Q99M54 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdca3Q99M54 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdca3Q99M54 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdca3Q99M54 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Cdca3Q99M54 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdca3Q99M54 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms