RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Ctxn1Q8K129 82 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Slc38a1Q8K2P7 485 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Apbb3Q8R1C9 486 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 V1ra11Q8R2E6 318 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Olfr868Q8VFI8 309 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Vmn1r45Q8VIC7 318 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Atg5Q99J83 275 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Stoml2Q99JB2 353 aaKnown RBP11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Sfxn1Q99JR1 322 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Arpc5Q9CPW4 151 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Q9CQT6 229 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Naalad2Q9CZR2 740 aa11.77□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm5519D3Z175 170 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm8159E9Q0R1 267 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm3685J3QPP2 205 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Sstr5O08858 362 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 AcheP21836 614 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Ptpn6P29351 595 aaKnown RBP11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 AhrP30561 848 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Rab11bP46638 218 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Crybb2P62696 205 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Acp5Q05117 327 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Bcl2a1cQ0P538 128 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Itpripl2Q3UV16 535 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 D11Wsu47eQ6PIX9 558 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Mettl20Q80ZM3 255 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Dcaf12l1Q8CBW4 501 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Esco2Q8CIB9 592 aaKnown RBP11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gtf2f2Q8R0A0 249 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Thap7Q8VCZ3 309 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Olfr583Q8VG25 319 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Vmn1r85Q8VIB8 308 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Hsbp1Q9CQZ1 76 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 NcdnQ9Z0E0 729 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Phf1Q9Z1B8 559 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Mbd4Q9Z2D7 554 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Fnd3c2A2AP83 941 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm10112D3YWP5 117 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Slc11a1P41251 548 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Rap2bP61226 183 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 ErgP81270 486 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Cd53Q61451 219 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 P4ha3Q6W3F0 542 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Rps27Q6ZWU9 84 aaKnown RBP11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 CblcQ80XL1 496 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gpr107Q8BUV8 551 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Prps1l1Q8C5R8 318 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 SuoxQ8R086 546 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Ttc36Q8VBW8 186 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Rdh10Q8VCH7 341 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Olfr160Q8VGE3 309 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Vsx1Q91V10 363 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Mrgpra3Q91WW3 302 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Eif3fQ9DCH4 361 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Lgi1Q9JIA1 557 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 SncgQ9Z0F7 123 aaKnown RBP11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Frem3Q5H8B9 2123 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Olfr1056A2AVY0 313 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Lin7bO88951 207 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Tpi1P17751 299 aaKnown RBP11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Ggta1P23336 394 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Cpne2P59108 548 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Il12rb2P97378 874 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Thbs2Q03350 1172 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Milr1Q3TB92 246 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Akt2Q60823 481 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Olfr728Q7TRM6 311 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Olfr1504Q8VFQ4 315 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Teddm3Q9CQH1 294 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Raet1dQ9JI58 249 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Adam26aQ9R158 697 aa11.76□□□□□ -0.53
Msh6-201ENSMUST00000005503 Igkv12-98A0A0G2JGF9 115 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm12789B1AUV7 164 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm17728E9Q5K2 132 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Vmn1r168K7N6B6 309 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Socs1O35716 212 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Hdac3O88895 424 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Tmem150cQ8C8S3 249 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Fbxw17Q8CFE8 466 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Flywch1Q8CI03 673 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Lin28aQ8K3Y3 209 aaKnown RBP11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Rpp25Q91WE3 199 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Dcbld2Q91ZV3 769 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Dnaja3Q99M87 480 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Zbtb8aQ9CWH1 434 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Cdca4Q9CWM2 237 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 SdhcQ9CZB0 169 aaKnown RBP11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Cited4Q9WUL8 182 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 SktA2AQ25 1946 aaKnown RBP11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Igkv5-39A0A0G2JDV4 115 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Gm13420A0A140LJJ2 248 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Fpr1P33766 364 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Btg1P62325 171 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Pgap2Q3TQR0 254 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Slc27a5Q4LDG0 689 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Grm7Q68ED2 915 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Hsh2dQ6VYH9 334 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Spata7Q80VP2 582 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Rab38Q8QZZ8 211 aa11.75□□□□□ -0.53
Msh6-201ENSMUST00000005503 Vmn1r51Q8VIC6 319 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms