RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 B3GNT2Q9NY97 397 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 LAMA1P25391 3075 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 PRUNE2Q8WUY3 3088 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 CACNA1CQ13936 2221 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 H7C1C5 153 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF749O43361 778 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 TPOP07202 933 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 DRD1P21728 446 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 SOX2P48431 317 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 VEGFCP49767 419 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 MAZP56270 477 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 LCN6P62502 163 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 IL10RAQ13651 578 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF74Q16587 644 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 LGALSLQ3ZCW2 172 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 MED25Q71SY5 747 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 OR8H3Q8N146 312 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 SYNPRQ8TBG9 265 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 CLIP3Q96DZ5 547 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 MAP6Q96JE9 813 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 MAP3K3Q99759 626 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 KLHDC3Q9BQ90 382 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 OR10A4Q9H209 315 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 NANSQ9NR45 359 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 OR5V1Q9UGF6 321 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 TMEM184BQ9Y519 407 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 A0A1B0GTH9 108 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 GABARAPH6UMI1 98 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 SLC22A5O76082 557 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 TOXO94900 526 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 THEGLP0DJG4 465 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 DNASE1P24855 282 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 PTH2RP49190 550 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 SELENOPP49908 381 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 CTXN1P60606 82 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 LIPNQ5VXI9 398 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 FAAP20Q6NZ36 180 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 ZSCAN1Q8NBB4 408 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 MRPL38Q96DV4 380 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 MMABQ96EY8 250 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 SLC19A3Q9BZV2 496 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 PLEKHA1Q9HB21 404 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 SRA1Q9HD15 236 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 MRM2Q9UI43 246 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 A0A1B0GVI7 797 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 H3BSH0 61 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 UPK3AO75631 287 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 CLPSP04118 112 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 CD14P08571 375 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF81P51508 661 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 ALG10Q5BKT4 473 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 FAM209AQ5JX71 171 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 PWWP2BQ6NUJ5 590 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 STAC2Q6ZMT1 411 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 Q6ZTK2 550 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 ATG4DQ86TL0 474 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 DNAAF1Q8NEP3 725 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 PHOSPHO1Q8TCT1 267 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 CDCP1Q9H5V8 836 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 FRRS1LQ9P0K9 344 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 KLHL9Q9P2J3 617 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 HIF3AQ9Y2N7 669 aa18.42■□□□□ 0.54
SHKBP1-225ENST00000600733 BRWD1Q9NSI6 2320 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 TVP23AA6NH52 213 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 MEN1O00255 615 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 KHNYNO15037 678 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 ITGA10O75578 1167 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 ADRA2CP18825 462 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 PSMB1P20618 241 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 MST1P26927 711 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 RPS27P42677 84 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 EGR4Q05215 589 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 TMEM69Q5SWH9 247 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 FAM69AQ5T7M9 428 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 WBP2NLQ6ICG8 309 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 APOOLQ6UXV4 268 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 SLC16A9Q7RTY1 509 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF321PQ8N8H1 164 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 EXD3Q8N9H8 876 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 LRRC75AQ8NAA5 344 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 TTC9Q92623 222 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 ADAD1Q96M93 576 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 METTL17Q9H7H0 456 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 MMP25Q9NPA2 562 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 PTTG3PQ9NZH4 202 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 FOXJ3Q9UPW0 622 aa18.41■□□□□ 0.54
SHKBP1-225ENST00000600733 KHDRBS3O75525 346 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 KRT33AO76009 404 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 HPGDP15428 266 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 LTBQ06643 244 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 ESCO2Q56NI9 601 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 FAM220AQ7Z4H9 259 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 ELMOD2Q8IZ81 293 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 FAM71CQ8NEG0 241 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 OR2T35Q8NGX2 323 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 OR5AK2Q8NH90 309 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 FCAMRQ8WWV6 532 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 DNAJA3Q96EY1 480 aa18.4■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF436Q9C0F3 470 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms