RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 MUCL1Q96DR8 90 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 CLEC4MQ9H2X3 399 aaPredicted RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 CHST11Q9NPF2 352 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 COQ3Q9NZJ6 369 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 SPATA2Q9UM82 520 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 GRIP1Q9Y3R0 1128 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 TRBV5-3A0A0A0MS03 114 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 TRGV8A0A0C4DH27 118 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 CLDN25C9JDP6 229 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 LOC110117498-PIK3R3F6TDL0 507 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 HCKP08631 526 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 FCGR2AP12318 317 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 IFNGR1P15260 489 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 RCVRNP35243 200 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 MALLQ13021 153 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 MZT2BQ6NZ67 158 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 SLC16A14Q7RTX9 510 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 MAML2Q8IZL2 1156 aaPredicted RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 TRIB1Q96RU8 372 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 FAM117AQ9C073 453 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 RNF6Q9Y252 685 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 SESN1Q9Y6P5 492 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 IQCMA0A1B0GVH7 501 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 CDX4O14627 284 aaPredicted RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 PDCD5O14737 125 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 SNPHO15079 494 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 WBP4O75554 376 aaKnown RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 E2F2Q14209 437 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 GFRALQ6UXV0 394 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 SLC35F2Q8IXU6 374 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 OR5M9Q8NGP3 310 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 RASD2Q96D21 266 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 SLC19A3Q9BZV2 496 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 GPR27Q9NS67 375 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 IDH3BO43837 385 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 LIFP15018 202 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 BMXP51813 675 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 CXCR4P61073 352 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ZFP36L1Q07352 338 aaKnown RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 ZNF141Q15928 474 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 NPSR1Q6W5P4 371 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 MEPCEQ7L2J0 689 aaKnown RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 MDGA2Q7Z553 956 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 LRRC18Q8N456 261 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 SPTSSAQ969W0 71 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 APH1AQ96BI3 265 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 FKRPQ9H9S5 495 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 PAQR5Q9NXK6 330 aaPredicted RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 DNAJB12Q9NXW2 375 aaKnown RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 MDC1Q14676 2089 aaKnown RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 CCDC88CQ9P219 2028 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 A0A075B6Q4 140 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 LOC101059948A0A1B0GTJ6 334 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ANKRD33BA6NCL7 494 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 CCRL2O00421 344 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 NTN3O00634 580 aaPredicted RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 ITGA5P08648 1049 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 CCL3P10147 92 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 MAPK3P27361 379 aaPredicted RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 CASP3P42574 277 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 VBP1P61758 197 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 SMN1Q16637 294 aaKnown RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 ZNF829Q3KNS6 432 aaPredicted RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 TP53I3Q53FA7 332 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ATP1A1-AS1Q5TC04 95 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 FAM205BPQ63HN1 556 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ZNF101Q8IZC7 436 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ALG12Q9BV10 488 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ABCB9Q9NP78 766 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 HDGFL3Q9Y3E1 203 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 IGHV3-15A0A0B4J1V0 119 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 A0A1W2PPK0 400 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 MASP2O00187 686 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 TNFSF11O14788 317 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 APLNRP35414 380 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 MAP2K6P52564 334 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 PCBP3P57721 371 aaKnown RBP9.19□□□□□ -0.94
SMG6-213ENST00000573166 TUBA4AP68366 448 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 HSF1Q00613 529 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 CD226Q15762 336 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 IDNKQ5T6J7 187 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 C10orf111Q8N326 155 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 FLVCR1-AS1Q8TAF5 88 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 PPP1R14BQ96C90 147 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ALG8Q9BVK2 526 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 B3GALT5Q9Y2C3 310 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ADAM18Q9Y3Q7 739 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 PCDHGB6Q9Y5F9 930 aa9.19□□□□□ -0.94
SMG6-213ENST00000573166 ZNF587BE7ETH6 402 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 SQSTM1Q13501 440 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 NHSL2Q5HYW2 709 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 KDM4DQ6B0I6 523 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ZNF813Q6ZN06 617 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 GPR119Q8TDV5 335 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 C3orf49Q96BT1 292 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 ARHGDIGQ99819 225 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 OR51B6Q9H340 312 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 TUBA8Q9NY65 449 aaPredicted RBP9.18□□□□□ -0.94
SMG6-213ENST00000573166 KLK4Q9Y5K2 254 aa9.18□□□□□ -0.94
SMG6-213ENST00000573166 IGHV1-45A0A0A0MS14 117 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms