RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TRAV36DV7A0A075B6V5 113 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 CCDC182A6NF36 153 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 J3QRE1 110 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 NPIPB7O75200 414 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 CLEC2LP0C7M8 214 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 PRKCAP17252 672 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 SLC2A5P22732 501 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 UQCRC1P31930 480 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 SUMO3P55854 103 aaPredicted RBP18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 SSPNQ14714 243 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 INPP5JQ15735 1006 aaPredicted RBP18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 IL20RBQ6UXL0 311 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 FAM98AQ8NCA5 519 aaKnown RBP18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 KCTD7Q96MP8 289 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 ZNF649Q9BS31 505 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 PTDSS2Q9BVG9 487 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 CDCP1Q9H5V8 836 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 NEK6Q9HC98 313 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 PPP4R1LQ9P1A2 415 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 TNFRSF10DQ9UBN6 386 aa18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 YARS2Q9Y2Z4 477 aaKnown RBP18.35■□□□□ 0.53
RIPPLY3-201ENST00000329553 GYPBP06028 91 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 SLC16A1P53985 500 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 RPS25P62851 125 aaKnown RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 IFITM2Q01629 132 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 RSBN1Q5VWQ0 802 aaPredicted RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 ZNF485Q8NCK3 441 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 GATAD2BQ8WXI9 593 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 ST8SIA1Q92185 356 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 SECISBP2Q96T21 854 aaKnown RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 FKRPQ9H9S5 495 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 KLHL21Q9UJP4 597 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 VDAC3Q9Y277 283 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 WIF1Q9Y5W5 379 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 CHCHD2Q9Y6H1 151 aaPredicted RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 A0A1W2PQ09 198 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 A0A1W2PQL4 384 aaPredicted RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 A8MVM7 634 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 TNFRSF10AO00220 468 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 IGHA1P01876 353 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 PAICSP22234 425 aaKnown RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 AZGP1P25311 298 aaKnown RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 SDC2P34741 201 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 CD79BP40259 229 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 RPS7P62081 194 aaKnown RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 RPL18Q07020 188 aaKnown RBP18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 ALG10Q5BKT4 473 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 XKRXQ6PP77 449 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 RELTQ969Z4 430 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 RASD2Q96D21 266 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 DDOQ99489 341 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 TIGARQ9NQ88 270 aa18.34■□□□□ 0.53
RIPPLY3-201ENST00000329553 EML6Q6ZMW3 1958 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 SLC22A31A6NKX4 558 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 IMPA2O14732 288 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 SEC14L5O43304 696 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 HIST1H2ABP04908 130 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 F13BP05160 661 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 F8A1P23610 371 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 CTXN1P60606 82 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 RPS15P62841 145 aaKnown RBP18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 SF3B4Q15427 424 aaKnown RBP eCLIP18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 CD200R1LQ6Q8B3 271 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 HIST3H2AQ7L7L0 130 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 NPEPL1Q8NDH3 523 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 PRSS33Q8NF86 280 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 HIST1H2ACQ93077 130 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 SLC25A36Q96CQ1 311 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 Q96M85 177 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 NMNAT3Q96T66 252 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 ARHGAP9Q9BRR9 750 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 OR11A1Q9GZK7 315 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 SDHAF3Q9NRP4 125 aa18.33■□□□□ 0.53
RIPPLY3-201ENST00000329553 IGLV3-32A0A0A0MS00 114 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 SLC30A4O14863 429 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 IDH3BO43837 385 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 CD14P08571 375 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 FGF9P31371 208 aaPredicted RBP18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 GABRA5P31644 462 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 SCN1BQ07699 218 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 ASAH1Q13510 395 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 STPG1Q5TH74 334 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 C1orf140Q5VVS0 124 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 OPN5Q6U736 354 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 FAM131AQ6UXB0 335 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 FAM122BQ7Z309 247 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 NANOGNBQ7Z5D8 188 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 GLRX5Q86SX6 157 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 RPS19BP1Q86WX3 136 aaKnown RBP18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 RAB43Q86YS6 212 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 GHDCQ8N2G8 530 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 PSD4Q8NDX1 1056 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 UFD1Q92890 307 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 C1GALT1C1Q96EU7 318 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZNF221Q9UK13 617 aa18.33■□□□□ 0.52
RIPPLY3-201ENST00000329553 CPAMD8Q8IZJ3 1885 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 KRT8P05787 483 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 MSX1P28360 303 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 Q0VFX4 171 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms