RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-216ENST00000569151 MADCAM1Q13477 382 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SYPL1Q16563 259 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 EIF2S3LQ2VIR3 472 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 UAP1L1Q3KQV9 507 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 EXOSC6Q5RKV6 272 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 MANEAQ5SRI9 462 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 PRAMEF14Q5SWL7 426 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SDHAF4Q5VUM1 108 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 TPGS2Q68CL5 300 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 EIF5AL1Q6IS14 154 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 SLC8B1Q6J4K2 584 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 H3F3CQ6NXT2 135 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 FUT10Q6P4F1 479 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 C22orf39Q6P5X5 142 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ANKRD16Q6P6B7 361 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZNF765Q7L2R6 523 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 TAS1R1Q7RTX1 841 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZNF546Q86UE3 836 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 CD163Q86VB7 1156 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 COMTD1Q86VU5 262 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 JAZF1Q86VZ6 243 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 TMEM173Q86WV6 379 aaPredicted RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 C1QL4Q86Z23 238 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SERPINA12Q8IW75 414 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SLC35F3Q8IY50 421 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 BEST3Q8N1M1 668 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZNF561Q8N587 486 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 COMMD1Q8N668 190 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 C17orf47Q8NEP4 570 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 TMEM185AQ8NFB2 350 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 OR10H4Q8NGA5 316 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 GPR148Q8TDV2 347 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 RNF141Q8WVD5 230 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 XAGE5Q8WWM1 108 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ASB12Q8WXK4 309 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 RSC1A1Q92681 617 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 RAD51AP1Q96B01 352 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZDHHC12Q96GR4 267 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SLC41A3Q96GZ6 507 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 FAM46AQ96IP4 442 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 AMDHD1Q96NU7 426 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 MS4A4EQ96PG1 132 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 FANCD2OSQ96PS1 177 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 CNN2Q99439 309 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 PARK7Q99497 189 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 TEAD3Q99594 435 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ELF4Q99607 663 aaPredicted RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZNF426Q9BUY5 554 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 TMPRSS5Q9H3S3 457 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ELAC1Q9H777 363 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 C8orf33Q9H7E9 229 aaPredicted RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 GSN-AS1Q9NRJ2 163 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZCCHC3Q9NUD5 404 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 NKIRAS2Q9NYR9 191 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 TREM2Q9NZC2 230 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 COMMD9Q9P000 198 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 CNIH4Q9P003 139 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SERTAD3Q9UJW9 196 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZNF223Q9UK11 482 aaPredicted RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 FBXL4Q9UKA2 621 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 MAFFQ9ULX9 164 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ICAM5Q9UMF0 924 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 FLVCR2Q9UPI3 526 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 HIF3AQ9Y2N7 669 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZNF281Q9Y2X9 895 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 MRPL42Q9Y6G3 142 aaKnown RBP4.22□□□□□ -1.73
BBS4-216ENST00000569151 V9GY05 133 aa4.22□□□□□ -1.73
BBS4-216ENST00000569151 SZT2Q5T011 3432 aa4.21□□□□□ -1.73
BBS4-216ENST00000569151 FRMPD3Q5JV73 1810 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 PLXNB3Q9ULL4 1909 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 TBC1D3KA0A087X1G2 549 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 TRBV5-5A0A0J9YX44 114 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 TEX13DA0A0J9YY54 714 aaPredicted RBP4.21□□□□□ -1.74
BBS4-216ENST00000569151 TMEM272A0A1B0GTI8 110 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 PMS2P1A4D2B8 440 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 TBC1D3BA6NDS4 549 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 TBC1D3FA6NER0 549 aaPredicted RBP4.21□□□□□ -1.74
BBS4-216ENST00000569151 OR5H14A6NHG9 310 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 UPK3BL1B0FP48 263 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 UPK3BL2E5RIL1 263 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 NPIPB9F8W1W9 429 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 GPR31O00270 319 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 RFXAPO00287 272 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 MFNGO00587 321 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 PPM1DO15297 605 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 NDUFS4O43181 175 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 EMC8O43402 210 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 TSPAN6O43657 245 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 CDC40O60508 579 aaKnown RBP eCLIP4.21□□□□□ -1.74
BBS4-216ENST00000569151 GREM1O60565 184 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 DUSP11O75319 330 aaKnown RBP4.21□□□□□ -1.74
BBS4-216ENST00000569151 EIF3GO75821 320 aaKnown RBP eCLIP4.21□□□□□ -1.74
BBS4-216ENST00000569151 PAPLNO95428 1278 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 SIX6O95475 246 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 IFNA10P01566 189 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 IGHV2-5P01817 119 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 CD74P04233 296 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 CRYBA1P05813 215 aa4.21□□□□□ -1.74
BBS4-216ENST00000569151 CTSLP07711 333 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms