RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-216ENST00000569151 AEBP2Q6ZN18 517 aaPredicted RBP12.73□□□□□ -0.37
BBS4-216ENST00000569151 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
BBS4-216ENST00000569151 PHF23Q9BUL5 403 aaPredicted RBP11.06□□□□□ -0.64
BBS4-216ENST00000569151 SENP3Q9H4L4 574 aaPredicted RBP10.73□□□□□ -0.69
BBS4-216ENST00000569151 PLPPR3Q6T4P5 718 aa10.24□□□□□ -0.77
BBS4-216ENST00000569151 FOXD1Q16676 465 aa9.96□□□□□ -0.82
BBS4-216ENST00000569151 ADRA2BP18089 450 aa9.75□□□□□ -0.85
BBS4-216ENST00000569151 PPP6R1Q9UPN7 881 aa9.72□□□□□ -0.85
BBS4-216ENST00000569151 PIAS4Q8N2W9 510 aaPredicted RBP9.48□□□□□ -0.89
BBS4-216ENST00000569151 MSH5O43196 834 aa9.09□□□□□ -0.95
BBS4-216ENST00000569151 KCNA4P22459 653 aa9.08□□□□□ -0.96
BBS4-216ENST00000569151 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
BBS4-216ENST00000569151 NCBP3Q53F19 620 aaKnown RBP8.84□□□□□ -0.99
BBS4-216ENST00000569151 SCAF1Q9H7N4 1312 aaKnown RBP8.81□□□□□ -1
BBS4-216ENST00000569151 MAPK8IP2Q13387 824 aaPredicted RBP8.8□□□□□ -1
BBS4-216ENST00000569151 NISCHQ9Y2I1 1504 aa8.79□□□□□ -1
BBS4-216ENST00000569151 NPM3O75607 178 aaKnown RBP8.75□□□□□ -1.01
BBS4-216ENST00000569151 CNKSR2Q8WXI2 1034 aa8.74□□□□□ -1.01
BBS4-216ENST00000569151 EHMT2Q96KQ7 1210 aa8.7□□□□□ -1.02
BBS4-216ENST00000569151 SLC4A1APQ9BWU0 796 aaKnown RBP8.67□□□□□ -1.02
BBS4-216ENST00000569151 DMRT2Q9Y5R5 561 aa8.59□□□□□ -1.03
BBS4-216ENST00000569151 RNF216Q9NWF9 866 aaPredicted RBP8.52□□□□□ -1.05
BBS4-216ENST00000569151 HOXD11P31277 338 aaPredicted RBP8.44□□□□□ -1.06
BBS4-216ENST00000569151 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
BBS4-216ENST00000569151 ZBTB22O15209 634 aa8.37□□□□□ -1.07
BBS4-216ENST00000569151 DCAF8L1A6NGE4 600 aa8.33□□□□□ -1.08
BBS4-216ENST00000569151 DNAJC5BQ9UF47 199 aa8.31□□□□□ -1.08
BBS4-216ENST00000569151 FOXD4L1Q9NU39 408 aa8.28□□□□□ -1.08
BBS4-216ENST00000569151 SLC4A2P04920 1241 aa8.22□□□□□ -1.09
BBS4-216ENST00000569151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.13□□□□□ -1.11
BBS4-216ENST00000569151 MYCNP04198 464 aaPredicted RBP8.07□□□□□ -1.12
BBS4-216ENST00000569151 POTEDQ86YR6 584 aa8.05□□□□□ -1.12
BBS4-216ENST00000569151 U3KPZ7 1027 aaPredicted RBP8□□□□□ -1.13
BBS4-216ENST00000569151 SAMD1Q6SPF0 538 aaPredicted RBP7.89□□□□□ -1.15
BBS4-216ENST00000569151 ATF5Q9Y2D1 282 aaPredicted RBP7.89□□□□□ -1.15
BBS4-216ENST00000569151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.88□□□□□ -1.15
BBS4-216ENST00000569151 ATXN8OSP0DMR3 200 aa7.88□□□□□ -1.15
BBS4-216ENST00000569151 HNRNPUL2Q1KMD3 747 aaKnown RBP7.88□□□□□ -1.15
BBS4-216ENST00000569151 RNF39Q9H2S5 420 aa7.82□□□□□ -1.16
BBS4-216ENST00000569151 APLP2Q06481 763 aa7.76□□□□□ -1.17
BBS4-216ENST00000569151 SPINK5Q9NQ38 1064 aaPredicted RBP7.76□□□□□ -1.17
BBS4-216ENST00000569151 TRHP20396 242 aaPredicted RBP7.74□□□□□ -1.17
BBS4-216ENST00000569151 CAPN15O75808 1086 aa7.73□□□□□ -1.17
BBS4-216ENST00000569151 HRCP23327 699 aa7.71□□□□□ -1.18
BBS4-216ENST00000569151 ZNF219Q9P2Y4 722 aaPredicted RBP7.71□□□□□ -1.18
BBS4-216ENST00000569151 C1QBPQ07021 282 aaKnown RBP7.7□□□□□ -1.18
BBS4-216ENST00000569151 PELP1Q8IZL8 1130 aaKnown RBP7.67□□□□□ -1.18
BBS4-216ENST00000569151 ABCB7O75027 752 aa7.64□□□□□ -1.19
BBS4-216ENST00000569151 FKBP8Q14318 412 aa7.64□□□□□ -1.19
BBS4-216ENST00000569151 POLA2Q14181 598 aa7.6□□□□□ -1.19
BBS4-216ENST00000569151 DCAF1Q9Y4B6 1507 aa7.57□□□□□ -1.2
BBS4-216ENST00000569151 CACNB1Q02641 598 aaPredicted RBP7.55□□□□□ -1.2
BBS4-216ENST00000569151 ZCCHC6Q5VYS8 1495 aaKnown RBP7.55□□□□□ -1.2
BBS4-216ENST00000569151 MKRN4PQ13434 485 aaPredicted RBP7.54□□□□□ -1.2
BBS4-216ENST00000569151 FBLN2P98095 1184 aa7.51□□□□□ -1.21
BBS4-216ENST00000569151 DSG3P32926 999 aa7.5□□□□□ -1.21
BBS4-216ENST00000569151 MYT1Q01538 1121 aa7.47□□□□□ -1.21
BBS4-216ENST00000569151 CCDC180Q9P1Z9 1646 aa7.46□□□□□ -1.21
BBS4-216ENST00000569151 SPDYE4A6NLX3 237 aa7.44□□□□□ -1.22
BBS4-216ENST00000569151 ZBTB12Q9Y330 459 aaPredicted RBP7.44□□□□□ -1.22
BBS4-216ENST00000569151 MYO15BQ96JP2 1530 aa7.43□□□□□ -1.22
BBS4-216ENST00000569151 ZEB1P37275 1124 aaPredicted RBP7.41□□□□□ -1.22
BBS4-216ENST00000569151 OSCARQ8IYS5 282 aa7.41□□□□□ -1.22
BBS4-216ENST00000569151 SHROOM4Q9ULL8 1493 aa7.36□□□□□ -1.23
BBS4-216ENST00000569151 SUPT5HO00267 1087 aaKnown RBP7.35□□□□□ -1.23
BBS4-216ENST00000569151 PCGF6Q9BYE7 350 aa7.35□□□□□ -1.23
BBS4-216ENST00000569151 TRIM26Q12899 539 aaPredicted RBP7.32□□□□□ -1.24
BBS4-216ENST00000569151 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
BBS4-216ENST00000569151 PROM2Q8N271 834 aa7.27□□□□□ -1.25
BBS4-216ENST00000569151 SPDYE2BA6NHP3 402 aa7.26□□□□□ -1.25
BBS4-216ENST00000569151 SPDYE6P0CI01 402 aa7.26□□□□□ -1.25
BBS4-216ENST00000569151 SPDYE2Q495Y8 402 aa7.26□□□□□ -1.25
BBS4-216ENST00000569151 PPARGC1BQ86YN6 1023 aaKnown RBP7.25□□□□□ -1.25
BBS4-216ENST00000569151 DNAJC5Q9H3Z4 198 aa7.24□□□□□ -1.25
BBS4-216ENST00000569151 RTN4Q9NQC3 1192 aaKnown RBP7.24□□□□□ -1.25
BBS4-216ENST00000569151 FBXO3Q9UK99 471 aa7.23□□□□□ -1.25
BBS4-216ENST00000569151 SSUH2Q9Y2M2 353 aa7.23□□□□□ -1.25
BBS4-216ENST00000569151 PABPN1Q86U42 306 aaKnown RBP eCLIP7.22□□□□□ -1.25
BBS4-216ENST00000569151 VASPP50552 380 aaPredicted RBP7.2□□□□□ -1.26
BBS4-216ENST00000569151 AMER1Q5JTC6 1135 aaPredicted RBP7.18□□□□□ -1.26
BBS4-216ENST00000569151 ABCC9O60706 1549 aa7.17□□□□□ -1.26
BBS4-216ENST00000569151 RBM42Q9BTD8 480 aaKnown RBP7.12□□□□□ -1.27
BBS4-216ENST00000569151 ACIN1Q9UKV3 1341 aaKnown RBP7.09□□□□□ -1.27
BBS4-216ENST00000569151 IFNLR1Q8IU57 520 aaPredicted RBP7.09□□□□□ -1.27
BBS4-216ENST00000569151 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
BBS4-216ENST00000569151 CENPBP07199 599 aaPredicted RBP7.08□□□□□ -1.28
BBS4-216ENST00000569151 PLCD3Q8N3E9 789 aa7.08□□□□□ -1.28
BBS4-216ENST00000569151 AKT1S1Q96B36 256 aa7.06□□□□□ -1.28
BBS4-216ENST00000569151 STAG3Q9UJ98 1225 aa7.06□□□□□ -1.28
BBS4-216ENST00000569151 RB1CC1Q8TDY2 1594 aa7.05□□□□□ -1.28
BBS4-216ENST00000569151 LOC105371045A0A1W2PR82 267 aa7.05□□□□□ -1.28
BBS4-216ENST00000569151 KLHL34Q8N239 644 aa7.05□□□□□ -1.28
BBS4-216ENST00000569151 CLEC11AQ9Y240 323 aa7.05□□□□□ -1.28
BBS4-216ENST00000569151 MIER1Q8N108 512 aa7.04□□□□□ -1.28
BBS4-216ENST00000569151 REM2Q8IYK8 340 aaPredicted RBP7.03□□□□□ -1.28
BBS4-216ENST00000569151 SPDYE1Q8NFV5 336 aaPredicted RBP7.02□□□□□ -1.29
BBS4-216ENST00000569151 CLSPNQ9HAW4 1339 aa7.01□□□□□ -1.29
BBS4-216ENST00000569151 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
BBS4-216ENST00000569151 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
BBS4-216ENST00000569151 PITPNM1O00562 1244 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms