RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 RP9Q8TA86 221 aaKnown RBP4.88□□□□□ -1.63
CDH13-211ENST00000568770 ZFP90Q8TF47 636 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 C16orf78Q8WTQ4 265 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 ZNF75CPQ92670 426 aaPredicted RBP4.88□□□□□ -1.63
CDH13-211ENST00000568770 FBXO17Q96EF6 278 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 GPR78Q96P69 363 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 SNX18Q96RF0 628 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 BBS4Q96RK4 519 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 DUSP26Q9BV47 211 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 TRIM31Q9BZY9 425 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 COQ10BQ9H8M1 238 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 ANKZF1Q9H8Y5 726 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 C3orf14Q9HBI5 128 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 MYOZ1Q9NP98 299 aaPredicted RBP4.88□□□□□ -1.63
CDH13-211ENST00000568770 OBP2BQ9NPH6 170 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 DDX18Q9NVP1 670 aaKnown RBP4.88□□□□□ -1.63
CDH13-211ENST00000568770 NMRK1Q9NWW6 199 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 KLHL9Q9P2J3 617 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 VPS29Q9UBQ0 182 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 PCTPQ9UKL6 214 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 SNX6Q9UNH7 406 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 LRCH1Q9Y2L9 728 aa4.88□□□□□ -1.63
CDH13-211ENST00000568770 CCDC189A1A4V9 331 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 CCT8L1PA6NM43 557 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 GJE1A6NN92 205 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 ATP6V1G2-DDX39BF2Z307 99 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 PPP6CO00743 305 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 ZNF195O14628 629 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 DHHO43323 396 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 CYTIPO60759 359 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 KLHL2O95198 593 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 SLU7O95391 586 aaKnown RBP4.87□□□□□ -1.63
CDH13-211ENST00000568770 NGFRP08138 427 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 TACSTD2P09758 323 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 HPGDP15428 266 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 CHN1P15882 459 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 TSPAN8P19075 237 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 GIFP27352 417 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 ELK4P28324 431 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 HMGA2P52926 109 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
CDH13-211ENST00000568770 CDH15P55291 814 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 TPTEP56180 551 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 SNRPD2P62316 118 aaKnown RBP4.87□□□□□ -1.63
CDH13-211ENST00000568770 TRADDQ15628 312 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 CD226Q15762 336 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 GABRA6Q16445 453 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 ZSWIM7Q19AV6 140 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 MIDNQ504T8 468 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 AWAT1Q58HT5 328 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 FBXW9Q5XUX1 488 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 DEF8Q6ZN54 512 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 CYS1Q717R9 158 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 SLC46A3Q7Z3Q1 461 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 GALNT5Q7Z7M9 940 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 AMIGO2Q86SJ2 522 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 UBE2J2Q8N2K1 259 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 GPR151Q8TDV0 419 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 ZNF418Q8TF45 676 aaPredicted RBP4.87□□□□□ -1.63
CDH13-211ENST00000568770 ELP4Q96EB1 424 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 MUS81Q96NY9 551 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 EBPLQ9BY08 206 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 GLIPR2Q9H4G4 154 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 ZNF696Q9H7X3 374 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 FKRPQ9H9S5 495 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 HHATLQ9HCP6 504 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 EQTNQ9NQ60 294 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 MOKQ9UQ07 419 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 SNX24Q9Y343 169 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 DTNAQ9Y4J8 743 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 PCDHGB1Q9Y5G3 927 aa4.87□□□□□ -1.63
CDH13-211ENST00000568770 A0A096LPK6 155 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 ZNF724A8MTY0 619 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 STX16-NPEPL1H3BU86 382 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 TRIM77I1YAP6 450 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 PSMD9O00233 223 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 MANBAO00462 879 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 STX16O14662 325 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 OR4F21O95013 312 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 KCNK2O95069 426 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 TNFRSF6BO95407 300 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 STAMBPO95630 424 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 NUDT14O95848 222 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 OTCP00480 354 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 HNRNPCP07910 306 aaKnown RBP eCLIP4.86□□□□□ -1.63
CDH13-211ENST00000568770 ANXA4P09525 319 aaPredicted RBP4.86□□□□□ -1.63
CDH13-211ENST00000568770 NHLRC4P0CG21 123 aaPredicted RBP4.86□□□□□ -1.63
CDH13-211ENST00000568770 HSD3B1P14060 373 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 DAOP14920 347 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 PGCP20142 388 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 PCMT1P22061 227 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 TIA1P31483 386 aaKnown RBP eCLIP4.86□□□□□ -1.63
CDH13-211ENST00000568770 SERPINF1P36955 418 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 MAP3K8P41279 467 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 DIO1P49895 249 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 CDH13P55290 713 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 FOXG1P55316 489 aaPredicted RBP4.86□□□□□ -1.63
CDH13-211ENST00000568770 HILS1P60008 231 aa4.86□□□□□ -1.63
CDH13-211ENST00000568770 ZNF117Q03924 483 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms