RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ZNF79Q15937 498 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 ZMAT1Q5H9K5 638 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 FNDC7Q5VTL7 733 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 ARHGAP11AQ6P4F7 1023 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 RTL4Q6ZR62 310 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 DTX1Q86Y01 620 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 FAM71CQ8NEG0 241 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 DNAJA4Q8WW22 397 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-205ENST00000464187 SGTBQ96EQ0 304 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 COQ7Q99807 217 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 HDHD5Q9BXW7 423 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 ADGRL4Q9HBW9 690 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 ABCB9Q9NP78 766 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 ASB6Q9NWX5 421 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 FBXL4Q9UKA2 621 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 ICAM5Q9UMF0 924 aa13.2□□□□□ -0.3
COL5A1-205ENST00000464187 A0A087WUJ7 227 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 CD8B2A6NJW9 211 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 MASP2O00187 686 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 HLA-DPB1P04440 258 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 MRPL3P09001 348 aaKnown RBP13.19□□□□□ -0.3
COL5A1-205ENST00000464187 GAAP10253 952 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 CD8BP10966 210 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 PEPDP12955 493 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 ADH7P40394 386 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 GALEQ14376 348 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 OR10H4Q8NGA5 316 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 OR5M3Q8NGP4 307 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 INPP5EQ9NRR6 644 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 P4HTMQ9NXG6 502 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 CHRNA9Q9UGM1 479 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 IL17BQ9UHF5 180 aa13.19□□□□□ -0.3
COL5A1-205ENST00000464187 SIRT4Q9Y6E7 314 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-205ENST00000464187 A0A1W2PQL4 384 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-205ENST00000464187 DAPL1A0PJW8 107 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 SHISA3A0PJX4 238 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 OIP5O43482 229 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 RNF13O43567 381 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 NDUFB2O95178 105 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 GYPBP06028 91 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 SBK2P0C263 348 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 SLC16A1P53985 500 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 FBXW4P57775 412 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 DEFA1P59665 94 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 DEFA3P59666 94 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 IGF2-ASQ6U949 168 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 TMEM91Q6ZNR0 172 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 ZNF440Q8IYI8 595 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 OR8H2Q8N162 312 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 LRRC17Q8N6Y2 441 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 ERMAPQ96PL5 475 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-205ENST00000464187 RASL10BQ96S79 203 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 RTN4RQ9BZR6 473 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 MCIDASD6RGH6 385 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 CASKO14936 926 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 HPP00738 406 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 IFNGP01579 166 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 UBL4AP11441 157 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 ICAM2P13598 275 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 NAGAP17050 411 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
COL5A1-205ENST00000464187 EVI2BP34910 448 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 TMED10P49755 219 aaKnown RBP13.18□□□□□ -0.3
COL5A1-205ENST00000464187 ZNF85Q03923 595 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 GPR50Q13585 617 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 EFR3AQ14156 821 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 TGIF1Q15583 401 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 GLYR1Q49A26 553 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-205ENST00000464187 CBLN3Q6UW01 205 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 MARCH3Q86UD3 253 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 SDR9C7Q8NEX9 313 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 NEIL3Q8TAT5 605 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 SLC22A8Q8TCC7 542 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 AP3S1Q92572 193 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 HAO2Q9NYQ3 351 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 POLHQ9Y253 713 aa13.18□□□□□ -0.3
COL5A1-205ENST00000464187 IGKV1D-42A0A075B6H8 117 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 A0A1W2PQD3 144 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
COL5A1-205ENST00000464187 DVL2O14641 736 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 ZNF264O43296 627 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 NDUFB5O43674 189 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 SSX4O60224 188 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 ITGA10O75578 1167 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 RGS9O75916 674 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-205ENST00000464187 HIST1H1CP16403 213 aaKnown RBP13.17□□□□□ -0.3
COL5A1-205ENST00000464187 GALP22466 123 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 SKP2Q13309 424 aa13.17□□□□□ -0.3
COL5A1-205ENST00000464187 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
COL5A1-205ENST00000464187 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-205ENST00000464187 GXYLT1Q4G148 440 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms