RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SEMA4CQ9C0C4 833 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 NXF5Q9H1B4 397 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ARMC7Q9H6L4 198 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 MRTO4Q9UKD2 239 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 PPIEQ9UNP9 301 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 FARSAQ9Y285 508 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 SAMHD1Q9Y3Z3 626 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 MAGED1Q9Y5V3 778 aaPredicted RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 DMXL2Q8TDJ6 3036 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 BSNQ9UPA5 3926 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 SMG1Q96Q15 3661 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 NUP210LQ5VU65 1888 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 LOC102723996A0A087X1L8 192 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 TRBV11-1A0A0K0K1C0 115 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 FFAR1O14842 300 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 TO15178 435 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 REM1O75628 298 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 GADD45GO95257 159 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 HPRP00739 348 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 PLAUP00749 431 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 IGHEP01854 428 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 UQCRBP14927 111 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 KRT20P35900 424 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ALDH3A2P51648 485 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 NR0B1P51843 470 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 PSMD4P55036 377 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 CDH12P55289 794 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 SMIM11AP58511 58 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 SLC26A5P58743 744 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 RPS15P62841 145 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 GK3PQ14409 553 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 GANABQ14697 944 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 DAZAP2Q15038 168 aaPredicted RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 NPTX1Q15818 432 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF141Q15928 474 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 PDZK1Q5T2W1 519 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 MRPL2Q5T653 305 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 WLSQ5T9L3 541 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 HS3ST5Q8IZT8 346 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ESX1Q8N693 406 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF614Q8N883 585 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF441Q8N8Z8 693 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 APCDD1LQ8NCL9 501 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 C17orf47Q8NEP4 570 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 OR5L2Q8NGL0 311 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 OR4C15Q8NGM1 316 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 OR52J3Q8NH60 311 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 CT55Q8WUE5 264 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 EFHD2Q96C19 240 aaPredicted RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 VMP1Q96GC9 406 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 NAF1Q96HR8 494 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 BARD1Q99728 777 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 RBM4BQ9BQ04 359 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ABHD14AQ9BUJ0 271 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 RBM4Q9BWF3 364 aaKnown RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 OSBPL11Q9BXB4 747 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 OSBPL10Q9BXB5 764 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 TRIM2Q9C040 744 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 B3GNT4Q9C0J1 378 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 HOXD1Q9GZZ0 328 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 EVA1AQ9H8M9 152 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 NMNAT1Q9HAN9 279 aaPredicted RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ACER3Q9NUN7 267 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 USE1Q9NZ43 259 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 PDP1Q9P0J1 537 aaPredicted RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 RHCGQ9UBD6 479 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF223Q9UK11 482 aaPredicted RBP6.65□□□□□ -1.34
UBE4B-204ENST00000462658 RAB26Q9ULW5 256 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 A4GNTQ9UNA3 340 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 RCE1Q9Y256 329 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 LYVE1Q9Y5Y7 322 aa6.65□□□□□ -1.34
UBE4B-204ENST00000462658 FER1L5A0AVI2 2057 aa6.65□□□□□ -1.35
UBE4B-204ENST00000462658 IGHV1-45A0A0A0MS14 117 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 SLC22A23A1A5C7 686 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 NPIPB9F8W1W9 429 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 DLGAP1O14490 977 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 AP3D1O14617 1153 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 HS6ST1O60243 411 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 TPST2O60704 377 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 ZFAND5O76080 213 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 UTS2O95399 124 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 ALPLP05186 524 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 H1F0P07305 194 aaKnown RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 HPGDP15428 266 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 MMP11P24347 488 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 IL12BP29460 328 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 LCN1P31025 176 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 IFNA8P32881 189 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 SOX2P48431 317 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 NOVA1P51513 510 aaKnown RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 RGS8P57771 180 aaPredicted RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 PSPHP78330 225 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 PPP2R2BQ00005 443 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 HOXC5Q00444 222 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 PLCXD2Q0VAA5 305 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 MERTKQ12866 999 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 FOXD4Q12950 439 aaPredicted RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 EXT1Q16394 746 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 ZSWIM7Q19AV6 140 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms