RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 ALG12Q9BV10 488 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 PARP12Q9H0J9 701 aaKnown RBP0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 LHX5Q9H2C1 402 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 WDR76Q9H967 626 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 DDX19AQ9NUU7 478 aaKnown RBP0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ANO10Q9NW15 660 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 KLHL28Q9NXS3 571 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 DNPEPQ9ULA0 475 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CDH9Q9ULB4 789 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RPL36Q9Y3U8 105 aaKnown RBP0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 FRMPD3Q5JV73 1810 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 FRMPD4Q14CM0 1322 aa0.56□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ZNF407Q9C0G0 2248 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 TRAV6A0A075B6T7 132 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 LOC110117498-PIK3R3F6TDL0 507 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CCER2I3L3R5 266 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RASGRF2O14827 1237 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CCNE2O96020 404 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 F10P00742 488 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ALDOBP05062 364 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 GKN3PP0CG01 181 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ZCCHC18P0CG32 403 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IGHV3-43DP0DP04 118 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IL1RNP18510 177 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 COX5AP20674 150 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 OPRK1P41145 380 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 PKNOX1P55347 436 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RPS11P62280 158 aaKnown RBP eCLIP0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 LOXL1Q08397 574 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ZNF616Q08AN1 781 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 PLD1Q13393 1074 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CHI3L2Q15782 390 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IYDQ6PHW0 289 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CASP12Q6UXS9 341 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ABHD13Q7L211 337 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 GET4Q7L5D6 327 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 SLC26A11Q86WA9 606 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ZNF679Q8IYX0 411 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 LINC01561Q8N1V8 128 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 SFRP1Q8N474 314 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 KIR3DL3Q8N743 410 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 GMCL1P1Q8NEA9 526 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 FAM71CQ8NEG0 241 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ZNF680Q8NEM1 530 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 NSMCE2Q96MF7 247 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 JAKMIP1Q96N16 626 aaKnown RBP0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 SGK2Q9HBY8 427 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 NEK6Q9HC98 313 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ISYNA1Q9NPH2 558 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 EXD2Q9NVH0 621 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ENOPH1Q9UHY7 261 aa0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CENPJQ9HC77 1338 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IGKV1D-8A0A087WSZ0 117 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IGHV3-74A0A0B4J1X5 117 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 TRDCB7Z8K6 153 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 NPIPA7E9PJI5 369 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 H0YHG0 523 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CLDN5O00501 218 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 XPO1O14980 1071 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 SLC7A4O43246 635 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CXCL13O43927 109 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 GOSR1O95249 250 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 STAMBPO95630 424 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RBMY1A1P0DJD3 496 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 NPIPA8P0DM63 369 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 PRPS2P11908 318 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 PGCP20142 388 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CYLC1P35663 651 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 TGFBR2P37173 567 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 AP3M2P53677 418 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ERVK-25P63136 954 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 TCP10Q12799 353 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IFT88Q13099 833 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RBMY1FQ15415 496 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 C2orf76Q3KRA6 126 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RABL6Q3YEC7 729 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 TMEM52BQ4KMG9 183 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CCDC91Q7Z6B0 441 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CALHM1Q8IU99 346 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CBWD2Q8IUF1 395 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 MREGQ8N565 214 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ATP6V0D2Q8N8Y2 350 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 CCNYQ8ND76 341 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 VN1R2Q8NFZ6 395 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 OR4K14Q8NGD5 310 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 OR51G2Q8NGK0 314 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 GEMIN6Q8WXD5 167 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 ITCHQ96J02 903 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 VPS35Q96QK1 796 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 SLC6A7Q99884 636 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 MRPL47Q9HD33 250 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 PARP11Q9NR21 331 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 IL20RAQ9UHF4 553 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 NPIPA1Q9UND3 350 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 STRAPQ9Y3F4 350 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 SHANK1Q9Y566 2161 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 RPGRIP1LQ68CZ1 1315 aa0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 DHX29Q7Z478 1369 aaKnown RBP0.54□□□□□ -2.32
RNU6-1048P-201ENST00000364054 A0A1B0GUS0 222 aa0.53□□□□□ -2.32
RNU6-1048P-201ENST00000364054 C5orf63A6NC05 138 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms