RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 CHST1O43916 411 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 BCAS1O75363 584 aaPredicted RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 TOM1L1O75674 476 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 IGF1P05019 195 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 CA3P07451 260 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 H2BFMP0C1H6 154 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 SMIM10L1P0DMW3 83 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 TGFBR1P36897 503 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 TNFSF9P41273 254 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 NAMPTP43490 491 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 CYB561P49447 251 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ZNF816Q0VGE8 651 aaPredicted RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ZBED5Q49AG3 693 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 OR6B2Q6IFH4 312 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 NLRP9Q7RTR0 991 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 KRT77Q7Z794 578 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 BIVMQ86UB2 503 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 SLC26A11Q86WA9 606 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ZNF573Q86YE8 665 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 RIMKLAQ8IXN7 391 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 RTN4IP1Q8WWV3 396 aaPredicted RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ESR2Q92731 530 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 FGF11Q92914 225 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 L3HYPDHQ96EM0 354 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 TVP23CQ96ET8 276 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 SMIM10Q96HG1 83 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 VPS35Q96QK1 796 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ZNF382Q96SR6 550 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 DESI2Q9BSY9 194 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 RIOK2Q9BVS4 552 aaKnown RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ZNF717Q9BY31 904 aaPredicted RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 NXF5Q9H1B4 397 aaKnown RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 WDR76Q9H967 626 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ROPN1Q9HAT0 212 aaPredicted RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 SYTL2Q9HCH5 934 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 GPATCH2LQ9NWQ4 482 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 CLCF1Q9UBD9 225 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 FOXJ3Q9UPW0 622 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 S4R3C0 116 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 NFASCO94856 1347 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 MN1Q10571 1320 aaPredicted RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 YEATS2Q9ULM3 1422 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.77□□□□□ -2.29
COMMD3-209ENST00000471350 MUC6Q6W4X9 2439 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 ITGB4P16144 1822 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 FANCIQ9NVI1 1328 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 A0A1B0GUS0 222 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 TMEM223A0PJW6 202 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 CCDC182A6NF36 153 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 SLC9B1P1A6NJY1 282 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 A8MUU9 505 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 TRDCB7Z8K6 153 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 J3QKU1 62 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 RAD51BO15315 384 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 RS1O15537 224 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 CXCL13O43927 109 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 KINO60870 393 aaKnown RBP0.76□□□□□ -2.29
COMMD3-209ENST00000471350 DEDDO75618 318 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 TRIM16O95361 564 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 STAMBPO95630 424 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ALDOBP05062 364 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 CSF3P09919 207 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 P0C880 135 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ZNF30P17039 623 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 PGCP20142 388 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 COX5AP20674 150 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 AHCYP23526 432 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 COL8A2P25067 703 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 SFNP31947 248 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 AP3M2P53677 418 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 PKNOX1P55347 436 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ESRRGP62508 458 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 SYCNQ0VAF6 134 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ASPHQ12797 758 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ERCC8Q13216 396 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 GUCA2BQ16661 112 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 TTLL9Q3SXZ7 439 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 BCL7AQ4VC05 210 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 AFTPHQ6ULP2 937 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 CES3Q6UWW8 571 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 HSDL2Q6YN16 418 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ANKRD23Q86SG2 305 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 TRIM69Q86WT6 500 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 LGI3Q8N145 548 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 NECAP1Q8NC96 275 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 OR4K14Q8NGD5 310 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ACOT11Q8WXI4 607 aaPredicted RBP0.76□□□□□ -2.29
COMMD3-209ENST00000471350 LRRC58Q96CX6 371 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 AURKBQ96GD4 344 aaPredicted RBP0.76□□□□□ -2.29
COMMD3-209ENST00000471350 RUFY1Q96T51 708 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 ACTR6Q9GZN1 396 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 RHBGQ9H310 441 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 SLCO1B3Q9NPD5 702 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 YAE1D1Q9NRH1 226 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 HOOK1Q9UJC3 728 aaKnown RBP0.76□□□□□ -2.29
COMMD3-209ENST00000471350 STAP1Q9ULZ2 295 aa0.76□□□□□ -2.29
COMMD3-209ENST00000471350 RPL36Q9Y3U8 105 aaKnown RBP0.76□□□□□ -2.29
COMMD3-209ENST00000471350 PTPRTO14522 1441 aa0.75□□□□□ -2.29
COMMD3-209ENST00000471350 ARPC4-TTLL3A0A0A6YYG9 625 aa0.75□□□□□ -2.29
COMMD3-209ENST00000471350 NSG1A0A0A6YYJ2 146 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms