RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PRRX2Q99811 253 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 QRSL1Q9H0R6 528 aaKnown RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 SEMA4GQ9NTN9 838 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 TRBV5-3A0A0A0MS03 114 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IDSB3KWA1 339 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IFNA10P01566 189 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IFNA4P05014 189 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 CD14P08571 375 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 MMP11P24347 488 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 SYT6Q5T7P8 510 aaPredicted RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 BCL2L15Q5TBC7 163 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 EIF5AL1Q6IS14 154 aaKnown RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 RPL22L1Q6P5R6 122 aaKnown RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 OR13C2Q8NGS9 318 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 NUDT8Q8WV74 236 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 MBOAT4Q96T53 435 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 NIPSNAP1Q9BPW8 284 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 DPCDQ9BVM2 203 aaPredicted RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IFT22Q9H7X7 185 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IQCMA0A1B0GVH7 501 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PPM1DO15297 605 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 UGT2B10P36537 528 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SLC1A3P43003 542 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PPP5CP53041 499 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 AKR1C8PQ5T2L2 129 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SLC22A10Q63ZE4 541 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 DNAJC5GQ8N7S2 189 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 EGLN3Q9H6Z9 239 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 MALT1Q9UDY8 824 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PCDHGA6Q9Y5G7 932 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 A0A075B6Q4 140 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF705EA8MWA4 302 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 NAGAP17050 411 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 ADAM8P78325 824 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF791Q3KP31 576 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 TCTN3Q6NUS6 607 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 FIP1L1Q6UN15 594 aaKnown RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SPATC1Q76KD6 591 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SLC35F3Q8IY50 421 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF100Q8IYN0 542 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 LNX2Q8N448 690 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 GDPD1Q8N9F7 314 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 INO80EQ8NBZ0 244 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SDR9C7Q8NEX9 313 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 CNOT9Q92600 299 aaKnown RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SPTSSAQ969W0 71 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PGAM5Q96HS1 289 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 VPS25Q9BRG1 176 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM9BQ9NQ34 198 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 FBXO4Q9UKT5 387 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 CROCCQ5TZA2 2017 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 TRAV27A0A087WT01 109 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 HSPA12AO43301 675 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 CTSVO60911 334 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PIGAP37287 484 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 TSPAN5P62079 268 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PRKCDQ05655 676 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 IGSF11Q5DX21 431 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 FTMTQ8N4E7 242 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SLC7A13Q8TCU3 470 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 GPR148Q8TDV2 347 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 ISYNA1Q9NPH2 558 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 KCNIP3Q9Y2W7 256 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SMIM30A4D0T7 59 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 IGHV4-34P06331 123 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 FOXK2Q01167 660 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM244Q5VVB8 128 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 PRICKLE2Q7Z3G6 844 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 BTLAQ7Z6A9 289 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 CADM3Q8N126 398 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 DUSP19Q8WTR2 217 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 SPRYD4Q8WW59 207 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-201ENST00000350148 KCNN3Q9UGI6 736 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 NOX1Q9Y5S8 564 aa11.2□□□□□ -0.62
SMAD9-201ENST00000350148 MYO7AQ13402 2215 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 CSTBP04080 98 aaKnown RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 HCKP08631 526 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 CSNK1A1P48729 337 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 KRBOX4Q5JUW0 171 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 FAM69AQ5T7M9 428 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 EEF1A1P5Q5VTE0 462 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 TBPL2Q6SJ96 375 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 C16orf52Q8NHV5 167 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 BRIX1Q8TDN6 353 aaKnown RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 CD300LFQ8TDQ1 290 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 ZMYND19Q96E35 227 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 SLC38A1Q9H2H9 487 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 NTN4Q9HB63 628 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 VDAC3Q9Y277 283 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 TET1Q8NFU7 2136 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 OR6C65A6NJZ3 312 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 EIF1AYO14602 144 aaKnown RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 SCG5P05408 212 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 RAB4AP20338 218 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms