RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ZNF28P17035 718 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 CHRNB2P17787 502 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SLC6A12P48065 614 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 KCNQ1P51787 676 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 FOXL2P58012 376 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MTFR1Q15390 333 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 XKR7Q5GH72 579 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 TFDP3Q5H9I0 405 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SPIN3Q5JUX0 258 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SIRPB2Q5JXA9 342 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 LAMTOR1Q6IAA8 161 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SLC8B1Q6J4K2 584 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 GDF6Q6KF10 455 aaPredicted RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 LCLAT1Q6UWP7 414 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MOB2Q70IA6 237 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 FAM220AQ7Z4H9 259 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SLC26A11Q86WA9 606 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 AMER2Q8N7J2 671 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 UBAC2Q8NBM4 344 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 OR4F15Q8NGB8 312 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SLC7A6Q92536 515 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 PINX1Q96BK5 328 aaKnown RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 KREMEN1Q96MU8 473 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 KCTD14Q9BQ13 255 aaPredicted RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 SF3B1O75533 1304 aaKnown RBP eCLIP7.28□□□□□ -1.242e-6■■■■■ 54.8
USP48-203ENST00000374732 OR5H14A6NHG9 310 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 E9PQ18 207 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 CLIC1O00299 241 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SEMA7AO75326 666 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 UPK1BO75841 260 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 DFFBO76075 338 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 IFNA7P01567 189 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 RLN1P04808 185 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 CA3P07451 260 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 FCGR1AP12314 374 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 ARL4DP49703 201 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 HMGCS2P54868 508 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SRSF1Q07955 248 aaKnown RBP eCLIP7.28□□□□□ -1.244e-8■■■□□ 14.6
USP48-203ENST00000374732 OR5I1Q13606 314 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 MPP2Q14168 576 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PSG3Q16557 428 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 Q6ZNB5 142 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 CBWD2Q8IUF1 395 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 TMEM123Q8N131 208 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 LRRC75A-AS1Q8N1F1 130 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 MFSD4AQ8N468 514 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 OR10X1Q8NGY0 326 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 TERB2Q8NHR7 220 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 ZDHHC1Q8WTX9 485 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PHF10Q8WUB8 498 aaKnown RBP7.28□□□□□ -1.24
USP48-203ENST00000374732 TLCD1Q96CP7 247 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SFRP2Q96HF1 295 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 TMEM176AQ96HP8 235 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SNX22Q96L94 193 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 TNFRSF13CQ96RJ3 184 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SLC6A7Q99884 636 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 THAP7Q9BT49 309 aaPredicted RBP7.28□□□□□ -1.24
USP48-203ENST00000374732 REG4Q9BYZ8 158 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 ULBP2Q9BZM5 246 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 MIR1-1HGQ9H1L0 117 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 EML4Q9HC35 981 aaKnown RBP7.28□□□□□ -1.24
USP48-203ENST00000374732 OSGIN1Q9UJX0 560 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 A3GALT2U3KPV4 340 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 F6UZH7 168 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 CCL25O15444 150 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PHGDHO43175 533 aaKnown RBP7.28□□□□□ -1.24
USP48-203ENST00000374732 ZMPSTE24O75844 475 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 OR4F21O95013 312 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 COMTP21964 271 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 GNRHRP30968 328 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SOAT1P35610 550 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 CKS1BP61024 79 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PRAMEF17Q5VTA0 474 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 DRAM2Q6UX65 266 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SHFQ7M4L6 423 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 CRLF3Q8IUI8 442 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PHYKPLQ8IUZ5 450 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 BAP18Q8IXM2 172 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 LRRC75AQ8NAA5 344 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 OR5K1Q8NHB7 308 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 NUDCD2Q8WVJ2 157 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 GHSRQ92847 366 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 RPL3LQ92901 407 aaKnown RBP7.28□□□□□ -1.24
USP48-203ENST00000374732 MOAP1Q96BY2 351 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 DCUN1D1Q96GG9 259 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SPATA5L1Q9BVQ7 753 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 FSD1LQ9BXM9 530 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PRO3102Q9H379 93 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 NECAP2Q9NVZ3 263 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 TAS2R14Q9NYV8 317 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 PLA2G3Q9NZ20 509 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 SUSD2Q9UGT4 822 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 UBQLN2Q9UHD9 624 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 NUDT5Q9UKK9 219 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 ATG4BQ9Y4P1 393 aa7.28□□□□□ -1.24
USP48-203ENST00000374732 MYH9P35579 1960 aaKnown RBP7.28□□□□□ -1.24
USP48-203ENST00000374732 ANXA2P2A6NMY6 339 aa7.27□□□□□ -1.24
USP48-203ENST00000374732 A8MXK9 166 aa7.27□□□□□ -1.24
USP48-203ENST00000374732 C9J4A7 227 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms