RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 SACM1LQ9NTJ5 587 aa11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MRPS18AQ9NVS2 196 aaKnown RBP11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 GPR83Q9NYM4 423 aa11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CHRNA9Q9UGM1 479 aa11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FBXL2Q9UKC9 423 aa11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 RPL36Q9Y3U8 105 aaKnown RBP11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 PKD1L2Q7Z442 2459 aa11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 DSPP15924 2871 aaKnown RBP11.6□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 KDM4EB2RXH2 506 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FAM47E-STBD1D6RA91 191 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 M0R129 80 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 GMFGO60234 142 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CBR3O75828 277 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 WISP1O95388 367 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 UQCRC1P31930 480 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CLK1P49759 484 aaKnown RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 DSCR4P56555 118 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FOXK2Q01167 660 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MFSD13AQ14CX5 517 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 PRAMEF20Q5VT98 475 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 AADACL4Q5VUY2 407 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 C1orf140Q5VVS0 124 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 LRRC75AQ8NAA5 344 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 POC1BQ8TC44 478 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 ZNF582Q96NG8 517 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MOGAT1Q96PD6 335 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FAM192AQ9GZU8 254 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 TIMMDC1Q9NPL8 285 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 NRIP3Q9NQ35 241 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CMC2Q9NRP2 79 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SERINC1Q9NRX5 453 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SLC6A5Q9Y345 797 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MRPS18CQ9Y3D5 142 aaKnown RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 URB1O60287 2271 aaKnown RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 A6NL46 340 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 LRRN3E7EW58 273 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 IMPA2O14732 288 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 PRODHO43272 600 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 RGS10O43665 173 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CDK1P06493 297 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CNR1P21554 472 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CD96P40200 585 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CASRP41180 1078 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CCL11P51671 97 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FOXF1Q12946 379 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MFAP5Q13361 173 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 TUBA3CQ13748 450 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 INPP5JQ15735 1006 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 ZNF362Q5T0B9 420 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 AGAP7PQ5VUJ5 663 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 TUBA3EQ6PEY2 450 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MAMDC2Q7Z304 686 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 GTPBP8Q8N3Z3 284 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 PSD4Q8NDX1 1056 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 FDCSPQ8NFU4 85 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 OR1J4Q8NGS1 313 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 MFSD8Q8NHS3 518 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SNRNP27Q8WVK2 155 aaKnown RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SGCDQ92629 289 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 PLEKHA8Q96JA3 519 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 LRR1Q96L50 414 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 AGAP4Q96P64 663 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 TUBA1CQ9BQE3 449 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 IFT27Q9BW83 186 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 NDEL1Q9GZM8 345 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 RNF32Q9H0A6 362 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 VCX3AQ9NNX9 186 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 ERVK-18Q9QC07 812 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SNX5Q9Y5X3 404 aa11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 SPIN1Q9Y657 262 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-AS3-201ENST00000307548 CACNA1BQ00975 2339 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 CFAP47Q6ZTR5 3102 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 SMIM31A0A1B0GVY4 71 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 ZC3H12DA2A288 527 aaKnown RBP11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 FTCDNL1E5RQL4 147 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 M0R3G1 203 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 EFNA2O43921 213 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 NEURL1O76050 574 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 AHSA1O95433 338 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 WDPCPO95876 746 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 HIST1H2ABP04908 130 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 HK1P19367 917 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 CCNA2P20248 432 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 PCMT1P22061 227 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 TTKP33981 857 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 MVKQ03426 396 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 TMED1Q13445 227 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 C1QL3Q5VWW1 255 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 RNLSQ5VYX0 342 aa11.58□□□□□ -0.56
SHANK2-AS3-201ENST00000307548 NXNL2Q5VZ03 156 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms