RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ADAM19Q9H013 955 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 ISYNA1Q9NPH2 558 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 ZNF337Q9Y3M9 751 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 ADAM18Q9Y3Q7 739 aa19.06■□□□□ 0.64
YBX3-202ENST00000279550 NDUFB5O43674 189 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 RAD1O60671 282 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 TSPAN19P0C672 248 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 RBMS1P29558 406 aaKnown RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 ATP6V1E1P36543 226 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 RPS4XP62701 263 aaKnown RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 RPS15P62841 145 aaKnown RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 LTBQ06643 244 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 TPBGQ13641 420 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 ZNF846Q147U1 533 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 RSPO4Q2I0M5 234 aaPredicted RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 ZNF404Q494X3 552 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 LINC00299Q6ZSB3 139 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 PSD4Q8NDX1 1056 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 ZNF563Q8TA94 476 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 THAP3Q8WTV1 239 aaPredicted RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 DTNBP1Q96EV8 351 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 MOGAT1Q96PD6 335 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 TEAD3Q99594 435 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 TBL1XR1Q9BZK7 514 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 SF3B6Q9Y3B4 125 aaKnown RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 PTPRZ1P23471 2315 aaPredicted RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 PTPRBP23467 1997 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 IGHV1-45A0A0A0MS14 117 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 C21orf140B9A014 251 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 GYPBP06028 91 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 HIST1H1CP16403 213 aaKnown RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 ZNF3P17036 446 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 CD82P27701 267 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 SLC6A8P48029 635 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 SLC26A5P58743 744 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 PCOLCEQ15113 449 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 ZNF74Q16587 644 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 KLHL36Q8N4N3 616 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 SDR9C7Q8NEX9 313 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 OR52E2Q8NGJ4 325 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 OR9Q1Q8NGQ5 310 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 OR4K13Q8NH42 304 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 SPRYD4Q8WW59 207 aaPredicted RBP19.05■□□□□ 0.64
YBX3-202ENST00000279550 TMEM203Q969S6 136 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 TP53INP1Q96A56 240 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 TBX5Q99593 518 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 GPR87Q9BY21 358 aa19.05■□□□□ 0.64
YBX3-202ENST00000279550 CNOT1A5YKK6 2376 aaKnown RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 TRBV11-1A0A0K0K1C0 115 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 TMEM200CA6NKL6 621 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 C12orf71A8MTZ7 269 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 TERTO14746 1132 aaKnown RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 EIF4E2O60573 245 aaKnown RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 IGHEP01854 428 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 MRPL3P09001 348 aaKnown RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 PSMA1P25786 263 aaKnown RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 EVI2BP34910 448 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 DLSTP36957 453 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 RPS7P62081 194 aaKnown RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 DNASE1L3Q13609 305 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 OR52N1Q8NH53 320 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 KTI12Q96EK9 354 aaPredicted RBP19.04■□□□□ 0.64
YBX3-202ENST00000279550 TIMP4Q99727 224 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 ASPNQ9BXN1 380 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 ZNF700Q9H0M5 742 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 ASCL3Q9NQ33 180 aa19.04■□□□□ 0.64
YBX3-202ENST00000279550 OR6C70A6NIJ9 312 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.03■□□□□ 0.64
YBX3-202ENST00000279550 IMPA2O14732 288 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 IFNGP01579 166 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 COX6A1P12074 109 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 ITPKBP27987 946 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 RPL4P36578 427 aaKnown RBP19.03■□□□□ 0.64
YBX3-202ENST00000279550 ERVK-25P63136 954 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 SSPNQ14714 243 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 ZNF322Q6U7Q0 402 aaPredicted RBP19.03■□□□□ 0.64
YBX3-202ENST00000279550 IGF2-ASQ6U949 168 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 DPY19L2P2Q6ZN68 376 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 GDPGP1Q6ZNW5 385 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 C10orf53Q8N6V4 93 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 FAM98AQ8NCA5 519 aaKnown RBP19.03■□□□□ 0.64
YBX3-202ENST00000279550 SMAP2Q8WU79 429 aaPredicted RBP19.03■□□□□ 0.64
YBX3-202ENST00000279550 FAM117AQ9C073 453 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 MMP27Q9H306 513 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 ISG20L2Q9H9L3 353 aaKnown RBP19.03■□□□□ 0.64
YBX3-202ENST00000279550 HMG20AQ9NP66 347 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 NPFFR2Q9Y5X5 522 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 CEP250Q9BV73 2442 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 A0A1W2PQ72 361 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 SLC22A31A6NKX4 558 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 IGF2P01344 180 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 F8A1P23610 371 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 AQP2P41181 271 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 SLC16A1P53985 500 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 FBXW4P57775 412 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 INAQ16352 499 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 ARMC4Q5T2S8 1044 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 C16orf87Q6PH81 154 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 ACBD7Q8N6N7 88 aa19.03■□□□□ 0.64
YBX3-202ENST00000279550 LRRC75AQ8NAA5 344 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms