RNA–Protein interactions for RNA: tP(AGG)C

SUF2, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene SUF2, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUF2tP(AGG)C EFM4P40516 257 aa13.34□□□□□ -0.27
SUF2tP(AGG)C YGR021WP53212 290 aa13.34□□□□□ -0.27
SUF2tP(AGG)C UBP3Q01477 912 aaKnown RBP RIP-Chip data13.34□□□□□ -0.27not detected
SUF2tP(AGG)C STE20Q03497 939 aaKnown RBP13.34□□□□□ -0.27
SUF2tP(AGG)C SML1Q04964 104 aa13.34□□□□□ -0.27
SUF2tP(AGG)C SHS1Q07657 551 aa13.34□□□□□ -0.27
SUF2tP(AGG)C SGT2Q12118 346 aaKnown RBP13.34□□□□□ -0.27
SUF2tP(AGG)C GIS3Q12418 502 aa13.34□□□□□ -0.27
SUF2tP(AGG)C YEL043WP32618 956 aa13.33□□□□□ -0.28
SUF2tP(AGG)C DUR3P33413 735 aa13.33□□□□□ -0.28
SUF2tP(AGG)C TRM2P33753 639 aa13.33□□□□□ -0.28
SUF2tP(AGG)C CCC2P38995 1004 aa13.33□□□□□ -0.28
SUF2tP(AGG)C PSY2P40164 858 aa13.33□□□□□ -0.28
SUF2tP(AGG)C ULP1Q02724 621 aa13.33□□□□□ -0.28
SUF2tP(AGG)C CEF1Q03654 590 aaPredicted RBP13.33□□□□□ -0.28
SUF2tP(AGG)C MAM3Q12296 706 aa13.33□□□□□ -0.28
SUF2tP(AGG)C RAD57P25301 460 aa13.32□□□□□ -0.28
SUF2tP(AGG)C HXT1P32465 570 aa13.32□□□□□ -0.28
SUF2tP(AGG)C CBF2P32504 956 aa13.32□□□□□ -0.28
SUF2tP(AGG)C KIC1P38692 1080 aa13.32□□□□□ -0.28
SUF2tP(AGG)C YMR124WP39523 943 aaKnown RBP13.32□□□□□ -0.28
SUF2tP(AGG)C CEP3P40969 608 aa13.32□□□□□ -0.28
SUF2tP(AGG)C DAS1P47005 663 aa13.32□□□□□ -0.28
SUF2tP(AGG)C PRY3P47033 881 aa13.32□□□□□ -0.28
SUF2tP(AGG)C ISM1P48526 1002 aa13.32□□□□□ -0.28
SUF2tP(AGG)C TAD1P53065 400 aa13.32□□□□□ -0.28
SUF2tP(AGG)C VPS62P53285 467 aa13.32□□□□□ -0.28
SUF2tP(AGG)C SYH1Q02875 849 aaKnown RBP13.32□□□□□ -0.28
SUF2tP(AGG)C SOV1Q04748 898 aa13.32□□□□□ -0.28
SUF2tP(AGG)C TRP2P00899 507 aaKnown RBP13.31□□□□□ -0.28
SUF2tP(AGG)C CPR7P47103 393 aa13.31□□□□□ -0.28
SUF2tP(AGG)C COX11P19516 300 aaKnown RBP13.3□□□□□ -0.28
SUF2tP(AGG)C LDH1P38139 375 aa13.3□□□□□ -0.28
SUF2tP(AGG)C TCD1P38756 429 aa13.3□□□□□ -0.28
SUF2tP(AGG)C CLA4P48562 842 aa13.3□□□□□ -0.28
SUF2tP(AGG)C JJJ1P53863 590 aa13.3□□□□□ -0.28
SUF2tP(AGG)C CWC21Q03375 135 aaKnown RBP13.3□□□□□ -0.28
SUF2tP(AGG)C YMR018WQ04364 514 aa13.3□□□□□ -0.28
SUF2tP(AGG)C MOT1P32333 1867 aa13.29□□□□□ -0.28
SUF2tP(AGG)C HEM1P09950 548 aaPredicted RBP13.29□□□□□ -0.28
SUF2tP(AGG)C DPB3P27344 201 aa13.29□□□□□ -0.28
SUF2tP(AGG)C BLI1P35727 113 aa13.29□□□□□ -0.28
SUF2tP(AGG)C SPC72P39723 622 aa13.29□□□□□ -0.28
SUF2tP(AGG)C BUD16P39988 312 aa13.29□□□□□ -0.28
SUF2tP(AGG)C KAP123P40069 1113 aaKnown RBP13.29□□□□□ -0.28
SUF2tP(AGG)C LAM5P43560 674 aa13.29□□□□□ -0.28
SUF2tP(AGG)C AZR1P50080 613 aa13.29□□□□□ -0.28
SUF2tP(AGG)C YNL134CP53912 376 aaKnown RBP13.29□□□□□ -0.28
SUF2tP(AGG)C VPS72Q03388 795 aa13.29□□□□□ -0.28
SUF2tP(AGG)C MCM16Q12262 181 aa13.29□□□□□ -0.28
SUF2tP(AGG)C SFI1Q12369 946 aa13.29□□□□□ -0.28
SUF2tP(AGG)C RIF1P29539 1916 aa13.29□□□□□ -0.28
SUF2tP(AGG)C ASP3-2P0CX77 362 aa13.28□□□□□ -0.28
SUF2tP(AGG)C ASP3-3P0CX78 362 aa13.28□□□□□ -0.28
SUF2tP(AGG)C ASP3-4P0CX79 362 aa13.28□□□□□ -0.28
SUF2tP(AGG)C ASP3-1P0CZ17 362 aa13.28□□□□□ -0.28
SUF2tP(AGG)C CSG2P35206 410 aa13.28□□□□□ -0.28
SUF2tP(AGG)C RRD1P40454 393 aaKnown RBP13.28□□□□□ -0.28
SUF2tP(AGG)C SBE2P42223 864 aaKnown RBP13.28□□□□□ -0.28
SUF2tP(AGG)C ALT2P52892 507 aa13.28□□□□□ -0.28
SUF2tP(AGG)C DRN1P53255 507 aaKnown RBP13.28□□□□□ -0.28
SUF2tP(AGG)C MAL13P53338 473 aa13.28□□□□□ -0.28
SUF2tP(AGG)C DOT1Q04089 582 aaKnown RBP13.28□□□□□ -0.28
SUF2tP(AGG)C NOP58Q12499 511 aaKnown RBP13.28□□□□□ -0.28
SUF2tP(AGG)C ZPS1Q12512 249 aa13.28□□□□□ -0.28
SUF2tP(AGG)C RPS3P05750 240 aaKnown RBP13.27□□□□□ -0.29
SUF2tP(AGG)C ADE2P21264 571 aaKnown RBP13.27□□□□□ -0.29
SUF2tP(AGG)C STE11P23561 717 aa13.27□□□□□ -0.29
SUF2tP(AGG)C YKL050CP35736 922 aa13.27□□□□□ -0.29
SUF2tP(AGG)C BYE1P36106 594 aa13.27□□□□□ -0.29
SUF2tP(AGG)C TRZ1P36159 838 aaPredicted RBP13.27□□□□□ -0.29
SUF2tP(AGG)C REI1P38344 393 aaPredicted RBP13.27□□□□□ -0.29
SUF2tP(AGG)C AFG3P39925 761 aa13.27□□□□□ -0.29
SUF2tP(AGG)C YTA12P40341 825 aa13.27□□□□□ -0.29
SUF2tP(AGG)C VPS70P47161 811 aa13.27□□□□□ -0.29
SUF2tP(AGG)C BOP3P53958 396 aa13.27□□□□□ -0.29
SUF2tP(AGG)C ABP140Q08641 628 aaKnown RBP13.27□□□□□ -0.29
SUF2tP(AGG)C NOP14Q99207 810 aaKnown RBP13.27□□□□□ -0.29
SUF2tP(AGG)C GLN3P18494 730 aa13.26□□□□□ -0.29
SUF2tP(AGG)C CDC42P19073 191 aa13.26□□□□□ -0.29
SUF2tP(AGG)C DAL2P25335 343 aa13.26□□□□□ -0.29
SUF2tP(AGG)C RRP1P35178 278 aaPredicted RBP13.26□□□□□ -0.29
SUF2tP(AGG)C UIP5P36137 443 aa13.26□□□□□ -0.29
SUF2tP(AGG)C YAP1801P38856 637 aa13.26□□□□□ -0.29
SUF2tP(AGG)C SET5P38890 526 aaKnown RBP13.26□□□□□ -0.29
SUF2tP(AGG)C YGR130CP53278 816 aa13.26□□□□□ -0.29
SUF2tP(AGG)C BTN2P53286 410 aa13.26□□□□□ -0.29
SUF2tP(AGG)C NGL3Q03210 505 aa13.26□□□□□ -0.29
SUF2tP(AGG)C ERV41Q04651 352 aa13.26□□□□□ -0.29
SUF2tP(AGG)C PCD1Q12524 340 aa13.26□□□□□ -0.29
SUF2tP(AGG)C AI5_BETAQ9ZZX0 354 aa13.26□□□□□ -0.29
SUF2tP(AGG)C IME1P21190 360 aa13.25□□□□□ -0.29
SUF2tP(AGG)C FUB1P25659 250 aa13.25□□□□□ -0.29
SUF2tP(AGG)C PRR1P28708 518 aa13.25□□□□□ -0.29
SUF2tP(AGG)C RPT1P33299 467 aaKnown RBP13.25□□□□□ -0.29
SUF2tP(AGG)C EXO5P38289 585 aa13.25□□□□□ -0.29
SUF2tP(AGG)C DYS1P38791 387 aa13.25□□□□□ -0.29
SUF2tP(AGG)C KAP114P53067 1004 aa13.25□□□□□ -0.29
SUF2tP(AGG)C ALG11P53954 548 aaKnown RBP13.25□□□□□ -0.29
SUF2tP(AGG)C MUK1Q02866 612 aa13.25□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms