RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR11, Length 258 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR11	snR11	PER1	P25625	357 aa		4.99	□□□□□ -1.61
snR11	snR11	UGO1	Q03327	502 aa		4.99	□□□□□ -1.61
snR11	snR11	GSF2	Q04697	403 aa	Known RBP	4.99	□□□□□ -1.61
snR11	snR11	YDR338C	Q05497	695 aa		4.99	□□□□□ -1.61
snR11	snR11	GPR1	Q12361	961 aa		4.99	□□□□□ -1.61
snR11	snR11	TUB2	P02557	457 aa	Known RBP	4.98	□□□□□ -1.61
snR11	snR11	CDC9	P04819	755 aa		4.98	□□□□□ -1.61
snR11	snR11	MCD4	P36051	919 aa		4.98	□□□□□ -1.61
snR11	snR11	RLP7	P40693	322 aa	Known RBP	4.98	□□□□□ -1.61
snR11	snR11	ALG12	P53730	551 aa		4.98	□□□□□ -1.61
snR11	snR11	PEX19	Q07418	342 aa		4.98	□□□□□ -1.61
snR11	snR11	SWM1	Q12379	170 aa		4.98	□□□□□ -1.61
snR11	snR11	TRM11	Q12463	433 aa		4.98	□□□□□ -1.61
snR11	snR11	TRP4	P07285	380 aa	Predicted RBP	4.97	□□□□□ -1.61
snR11	snR11	CAD1	P24813	409 aa	Known RBP	4.97	□□□□□ -1.61
snR11	snR11	HRR25	P29295	494 aa	Known RBP	4.97	□□□□□ -1.61
snR11	snR11	CTF13	P35203	478 aa		4.97	□□□□□ -1.61
snR11	snR11	SAP190	P36123	1033 aa		4.97	□□□□□ -1.61
snR11	snR11	AIM21	P40563	679 aa		4.97	□□□□□ -1.61
snR11	snR11	SSY5	P47002	699 aa		4.97	□□□□□ -1.61
snR11	snR11	RNH70	P53331	553 aa		4.97	□□□□□ -1.61
snR11	snR11	KIN4	Q01919	800 aa		4.97	□□□□□ -1.61
snR11	snR11	POB3	Q04636	552 aa	Known RBP	4.97	□□□□□ -1.61
snR11	snR11	NTG2	Q08214	380 aa		4.97	□□□□□ -1.61
snR11	snR11	PUS9	Q12069	462 aa		4.97	□□□□□ -1.61
snR11	snR11	DIF1	O13577	133 aa		4.96	□□□□□ -1.62
snR11	snR11	GSY1	P23337	708 aa		4.96	□□□□□ -1.62
snR11	snR11	VBA3	P25594	458 aa		4.96	□□□□□ -1.62
snR11	snR11	CHS7	P38843	316 aa		4.96	□□□□□ -1.62
snR11	snR11	VHR1	P40522	640 aa		4.96	□□□□□ -1.62
snR11	snR11	ALY2	P47029	1046 aa		4.96	□□□□□ -1.62
snR11	snR11	MSE1	P48525	536 aa		4.96	□□□□□ -1.62
snR11	snR11	ZIP2	P53061	704 aa		4.96	□□□□□ -1.62
snR11	snR11	MUS81	Q04149	632 aa	Predicted RBP	4.96	□□□□□ -1.62
snR11	snR11	MET6	P05694	767 aa	Known RBP	4.95	□□□□□ -1.62
snR11	snR11	EFT1	P32324	842 aa	Known RBP	4.95	□□□□□ -1.62
snR11	snR11	PEX6	P33760	1030 aa		4.95	□□□□□ -1.62
snR11	snR11	STO1	P34160	861 aa	Known RBP	4.95	□□□□□ -1.62
snR11	snR11	SIC1	P38634	284 aa		4.95	□□□□□ -1.62
snR11	snR11	DSS1	P39112	969 aa		4.95	□□□□□ -1.62
snR11	snR11	SHR5	P41912	237 aa		4.95	□□□□□ -1.62
snR11	snR11	PFA3	P42836	336 aa		4.95	□□□□□ -1.62
snR11	snR11	CAF16	P43569	289 aa		4.95	□□□□□ -1.62
snR11	snR11	ZDS1	P50111	915 aa	Known RBP	4.95	□□□□□ -1.62
snR11	snR11	MRPS35	P53292	345 aa		4.95	□□□□□ -1.62
snR11	snR11	SUN4	P53616	420 aa		4.95	□□□□□ -1.62
snR11	snR11	URN1	Q06525	465 aa	Known RBP	4.95	□□□□□ -1.62
snR11	snR11	SRD1	P09007	221 aa		4.94	□□□□□ -1.62
snR11	snR11	MIH1	P23748	554 aa		4.94	□□□□□ -1.62
snR11	snR11	NMD2	P38798	1089 aa	Known RBP	4.94	□□□□□ -1.62
snR11	snR11	SAK1	P38990	1142 aa		4.94	□□□□□ -1.62
snR11	snR11	SNP1	Q00916	300 aa	Predicted RBP	4.94	□□□□□ -1.62
snR11	snR11	TRM13	Q12383	476 aa		4.94	□□□□□ -1.62
snR11	snR11	YLR415C	O13578	112 aa		4.93	□□□□□ -1.62
snR11	snR11	RPP1	P38786	293 aa		4.93	□□□□□ -1.62
snR11	snR11	PZF1	P39933	429 aa		4.93	□□□□□ -1.62
snR11	snR11	SLI1	P53304	468 aa		4.93	□□□□□ -1.62
snR11	snR11	ASM4	Q05166	528 aa		4.93	□□□□□ -1.62
snR11	snR11	YLR040C	Q07988	224 aa		4.93	□□□□□ -1.62
snR11	snR11	AIM39	Q08223	395 aa		4.93	□□□□□ -1.62
snR11	snR11	PPG1	P32838	368 aa		4.92	□□□□□ -1.62
snR11	snR11	PKH1	Q03407	766 aa		4.92	□□□□□ -1.62
snR11	snR11	YLR001C	Q07895	862 aa		4.92	□□□□□ -1.62
snR11	snR11	YLR149C	Q99296	730 aa		4.92	□□□□□ -1.62
snR11	snR11	ERG4	P25340	473 aa		4.91	□□□□□ -1.62
snR11	snR11	HOG1	P32485	435 aa		4.91	□□□□□ -1.62
snR11	snR11	KTR4	P38131	464 aa		4.91	□□□□□ -1.62
snR11	snR11	FKH2	P41813	862 aa		4.91	□□□□□ -1.62
snR11	snR11	BNA2	P47125	453 aa		4.91	□□□□□ -1.62
snR11	snR11	CRR1	Q05790	422 aa		4.91	□□□□□ -1.62
snR11	snR11	PCL2	P25693	308 aa		4.9	□□□□□ -1.63
snR11	snR11	YEL1	P34225	687 aa		4.9	□□□□□ -1.63
snR11	snR11	RAD18	P10862	487 aa		4.89	□□□□□ -1.63
snR11	snR11	NGG1	P32494	702 aa		4.89	□□□□□ -1.63
snR11	snR11	ELO3	P40319	345 aa		4.89	□□□□□ -1.63
snR11	snR11	MTR3	P48240	250 aa	Predicted RBP	4.89	□□□□□ -1.63
snR11	snR11	NRG1	Q03125	231 aa		4.89	□□□□□ -1.63
snR11	snR11	COG8	Q04632	607 aa		4.89	□□□□□ -1.63
snR11	snR11	YOL073C	Q08232	322 aa		4.89	□□□□□ -1.63
snR11	snR11	Q0142	Q9ZZW4	58 aa		4.89	□□□□□ -1.63
snR11	snR11	MET3	P08536	511 aa		4.88	□□□□□ -1.63
snR11	snR11	YKR051W	P36142	418 aa		4.88	□□□□□ -1.63
snR11	snR11	YBR053C	P38235	358 aa		4.88	□□□□□ -1.63
snR11	snR11	RPN10	P38886	268 aa	Known RBP	4.88	□□□□□ -1.63
snR11	snR11	MNN1	P39106	762 aa		4.88	□□□□□ -1.63
snR11	snR11	TFB2	Q02939	513 aa		4.88	□□□□□ -1.63
snR11	snR11	NHX1	Q04121	633 aa		4.88	□□□□□ -1.63
snR11	snR11	TGL5	Q12043	749 aa		4.88	□□□□□ -1.63
snR11	snR11	PNS1	Q12412	539 aa		4.88	□□□□□ -1.63
snR11	snR11	HMG1	P12683	1054 aa		4.87	□□□□□ -1.63
snR11	snR11	PCM1	P38628	557 aa	Known RBP	4.87	□□□□□ -1.63
snR11	snR11	ECM1	P39715	212 aa		4.87	□□□□□ -1.63
snR11	snR11	YFL052W	P43551	465 aa		4.87	□□□□□ -1.63
snR11	snR11	MUP1	P50276	574 aa		4.87	□□□□□ -1.63
snR11	snR11	RNT1	Q02555	471 aa		4.87	□□□□□ -1.63
snR11	snR11	DLT1	Q04216	342 aa		4.87	□□□□□ -1.63
snR11	snR11	NOP14	Q99207	810 aa	Known RBP	4.87	□□□□□ -1.63
snR11	snR11	PPR1	P07272	904 aa	Predicted RBP	4.86	□□□□□ -1.63
snR11	snR11	CAF20	P12962	161 aa	Known RBP	4.86	□□□□□ -1.63
snR11	snR11	YKR018C	P36114	725 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms