RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YOR022C	Q12204	715 aa		3.48	□□□□□ -1.85
YPR039W	YPR039W	SUT2	Q12286	268 aa		3.48	□□□□□ -1.85
YPR039W	YPR039W	DAL7	P21826	554 aa		3.47	□□□□□ -1.85
YPR039W	YPR039W	GGA2	P38817	585 aa	Known RBP	3.47	□□□□□ -1.85
YPR039W	YPR039W	SAK1	P38990	1142 aa		3.47	□□□□□ -1.85
YPR039W	YPR039W	RSP5	P39940	809 aa	Known RBP	3.47	□□□□□ -1.85
YPR039W	YPR039W	UBP6	P43593	499 aa	Known RBP	3.47	□□□□□ -1.85
YPR039W	YPR039W	DUS1	P53759	423 aa	Known RBP	3.47	□□□□□ -1.85
YPR039W	YPR039W	TAF8	Q03750	510 aa		3.47	□□□□□ -1.85
YPR039W	YPR039W	MUS81	Q04149	632 aa	Predicted RBP	3.47	□□□□□ -1.85
YPR039W	YPR039W	CRR1	Q05790	422 aa		3.47	□□□□□ -1.85
YPR039W	YPR039W	YOL098C	Q12496	1037 aa		3.47	□□□□□ -1.85
YPR039W	YPR039W	MPH2	P0CD99	609 aa		3.46	□□□□□ -1.86
YPR039W	YPR039W	YBR053C	P38235	358 aa		3.46	□□□□□ -1.86
YPR039W	YPR039W	ASI2	P53895	289 aa		3.46	□□□□□ -1.86
YPR039W	YPR039W	PKH1	Q03407	766 aa		3.46	□□□□□ -1.86
YPR039W	YPR039W	LRS4	Q04087	347 aa	Known RBP	3.46	□□□□□ -1.86
YPR039W	YPR039W	HBT1	Q07653	1046 aa	Known RBP	3.46	□□□□□ -1.86
YPR039W	YPR039W	CAN1	P04817	590 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	TOM70	P07213	617 aa	Known RBP	3.45	□□□□□ -1.86
YPR039W	YPR039W	GAL11	P19659	1081 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	SRP40	P32583	406 aa	Predicted RBP	3.45	□□□□□ -1.86
YPR039W	YPR039W	CUE2	P36075	443 aa	Known RBP	3.45	□□□□□ -1.86
YPR039W	YPR039W	BET3	P36149	193 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	OCA5	P38738	679 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	YHL017W	P38745	532 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	PCL5	P38794	229 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	YJL163C	P46996	555 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	SSY5	P47002	699 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	TAD1	P53065	400 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	ASM4	Q05166	528 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	IRC13	Q08630	104 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.45	□□□□□ -1.86	not detected
YPR039W	YPR039W	YOR131C	Q12486	218 aa		3.45	□□□□□ -1.86
YPR039W	YPR039W	PRC1	P00729	532 aa		3.44	□□□□□ -1.86
YPR039W	YPR039W	TDP1	P38319	544 aa		3.44	□□□□□ -1.86
YPR039W	YPR039W	PZF1	P39933	429 aa		3.44	□□□□□ -1.86
YPR039W	YPR039W	GYP8	P43570	497 aa		3.44	□□□□□ -1.86
YPR039W	YPR039W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.44	□□□□□ -1.86	not detected
YPR039W	YPR039W	NIT3	P49954	291 aa		3.44	□□□□□ -1.86
YPR039W	YPR039W	RTA1	P53047	317 aa		3.44	□□□□□ -1.86
YPR039W	YPR039W	EMC3	P36039	253 aa		3.43	□□□□□ -1.86
YPR039W	YPR039W	CHZ1	P40019	153 aa	Predicted RBP	3.43	□□□□□ -1.86
YPR039W	YPR039W	PFA3	P42836	336 aa		3.43	□□□□□ -1.86
YPR039W	YPR039W	DAS1	P47005	663 aa		3.43	□□□□□ -1.86
YPR039W	YPR039W	NOG2	P53742	486 aa	Known RBP	3.43	□□□□□ -1.86
YPR039W	YPR039W	BNR1	P40450	1375 aa		3.42	□□□□□ -1.86
YPR039W	YPR039W	YLR415C	O13578	112 aa		3.42	□□□□□ -1.86
YPR039W	YPR039W	YKL091C	P33324	310 aa	Known RBP	3.42	□□□□□ -1.86
YPR039W	YPR039W	HIS7	P33734	552 aa	Known RBP	3.42	□□□□□ -1.86
YPR039W	YPR039W	ALG2	P43636	503 aa		3.42	□□□□□ -1.86
YPR039W	YPR039W	DAM1	P53267	343 aa		3.42	□□□□□ -1.86
YPR039W	YPR039W	YGR283C	P53336	341 aa	Predicted RBP	3.42	□□□□□ -1.86
YPR039W	YPR039W	NRG1	Q03125	231 aa		3.42	□□□□□ -1.86
YPR039W	YPR039W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
YPR039W	YPR039W	PPZ2	P33329	710 aa		3.41	□□□□□ -1.86
YPR039W	YPR039W	SAP190	P36123	1033 aa		3.41	□□□□□ -1.86
YPR039W	YPR039W	AMA1	P50082	593 aa		3.41	□□□□□ -1.86
YPR039W	YPR039W	RPN4	Q03465	531 aa		3.41	□□□□□ -1.86
YPR039W	YPR039W	RSC3	Q06639	885 aa		3.41	□□□□□ -1.86
YPR039W	YPR039W	TGL5	Q12043	749 aa		3.41	□□□□□ -1.86
YPR039W	YPR039W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
YPR039W	YPR039W	YIR042C	P40586	236 aa		3.4	□□□□□ -1.87
YPR039W	YPR039W	TAH11	P47112	604 aa		3.4	□□□□□ -1.87
YPR039W	YPR039W	VPS73	P53142	486 aa	Known RBP	3.4	□□□□□ -1.87
YPR039W	YPR039W	YDR514C	Q04408	483 aa		3.4	□□□□□ -1.87
YPR039W	YPR039W	GPR1	Q12361	961 aa		3.4	□□□□□ -1.87
YPR039W	YPR039W	ERR1	P0CX10	437 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	ERR2	P0CX11	437 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	NGG1	P32494	702 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	SPC29	P33419	253 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	CBR1	P38626	284 aa	Known RBP	3.39	□□□□□ -1.87
YPR039W	YPR039W	BCD1	P38772	366 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	RIX1	P38883	763 aa	Predicted RBP	3.39	□□□□□ -1.87
YPR039W	YPR039W	HOS4	P40480	1083 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	BUD6	P41697	788 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	ATP25	Q03153	612 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	REH1	Q06709	432 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	MET7	Q08645	548 aa		3.39	□□□□□ -1.87
YPR039W	YPR039W	MET6	P05694	767 aa	Known RBP	3.38	□□□□□ -1.87
YPR039W	YPR039W	LAT1	P12695	482 aa	Known RBP	3.38	□□□□□ -1.87
YPR039W	YPR039W	KIN3	P22209	435 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	TIM23	P32897	222 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	FLO10	P36170	1169 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	GDH3	P39708	457 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	HSV2	P50079	448 aa	Predicted RBP	3.38	□□□□□ -1.87
YPR039W	YPR039W	RIA1	P53893	1110 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	THI21	Q08975	551 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	YBR182C-A	Q8TGU6	64 aa		3.38	□□□□□ -1.87
YPR039W	YPR039W	GFA1	P14742	717 aa	Known RBP	3.37	□□□□□ -1.87
YPR039W	YPR039W	MDM10	P18409	493 aa		3.37	□□□□□ -1.87
YPR039W	YPR039W	CDC43	P18898	376 aa		3.37	□□□□□ -1.87
YPR039W	YPR039W	PER1	P25625	357 aa		3.37	□□□□□ -1.87
YPR039W	YPR039W	SET5	P38890	526 aa	Known RBP	3.37	□□□□□ -1.87
YPR039W	YPR039W	NUP82	P40368	713 aa		3.37	□□□□□ -1.87
YPR039W	YPR039W	MTR3	P48240	250 aa	Predicted RBP	3.37	□□□□□ -1.87
YPR039W	YPR039W	NDJ1	Q12366	352 aa		3.37	□□□□□ -1.87
YPR039W	YPR039W	FMP52	P40008	231 aa		3.36	□□□□□ -1.87
YPR039W	YPR039W	RLP7	P40693	322 aa	Known RBP	3.36	□□□□□ -1.87
YPR039W	YPR039W	SHR5	P41912	237 aa		3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms