RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	SPT8	P38915	602 aa		4.73	□□□□□ -1.65
APC1	YNL172W	TAM41	P53230	385 aa		4.73	□□□□□ -1.65
APC1	YNL172W	RPN7	Q06103	429 aa	Known RBP	4.73	□□□□□ -1.65
APC1	YNL172W	FMP25	Q08023	583 aa		4.73	□□□□□ -1.65
APC1	YNL172W	RPL22A	P05749	121 aa	Known RBP	4.73	□□□□□ -1.65
APC1	YNL172W	PTP1	P25044	335 aa		4.73	□□□□□ -1.65
APC1	YNL172W	HCM1	P25364	564 aa		4.73	□□□□□ -1.65
APC1	YNL172W	SUV3	P32580	737 aa		4.73	□□□□□ -1.65
APC1	YNL172W	URB2	P47108	1174 aa		4.73	□□□□□ -1.65
APC1	YNL172W	RPA49	Q01080	415 aa	Predicted RBP	4.73	□□□□□ -1.65
APC1	YNL172W	VID22	Q05934	901 aa		4.73	□□□□□ -1.65
APC1	YNL172W	OXR1	Q08952	273 aa		4.73	□□□□□ -1.65
APC1	YNL172W	STB3	Q12427	513 aa		4.73	□□□□□ -1.65
APC1	YNL172W	YHR078W	P38799	552 aa		4.73	□□□□□ -1.65
APC1	YNL172W	GID8	P40208	455 aa		4.73	□□□□□ -1.65
APC1	YNL172W	ASE1	P50275	885 aa		4.73	□□□□□ -1.65
APC1	YNL172W	MRK1	P50873	501 aa		4.73	□□□□□ -1.65
APC1	YNL172W	PGA2	P53903	129 aa		4.73	□□□□□ -1.65
APC1	YNL172W	PRM6	Q04705	352 aa		4.73	□□□□□ -1.65
APC1	YNL172W	RRD2	Q12461	358 aa		4.73	□□□□□ -1.65
APC1	YNL172W	COX3	P00420	269 aa		4.73	□□□□□ -1.65
APC1	YNL172W	LAT1	P12695	482 aa	Known RBP	4.73	□□□□□ -1.65
APC1	YNL172W	CHS2	P14180	963 aa		4.73	□□□□□ -1.65
APC1	YNL172W	MTF1	P14908	341 aa	Known RBP	4.73	□□□□□ -1.65
APC1	YNL172W	CSE2	P33308	149 aa		4.73	□□□□□ -1.65
APC1	YNL172W	YGR250C	P53316	781 aa	Known RBP	4.73	□□□□□ -1.65
APC1	YNL172W	YDR338C	Q05497	695 aa		4.73	□□□□□ -1.65
APC1	YNL172W	RPC31	P17890	251 aa		4.72	□□□□□ -1.65
APC1	YNL172W	GPI10	P30777	616 aa		4.72	□□□□□ -1.65
APC1	YNL172W	UBC6	P33296	250 aa	Predicted RBP	4.72	□□□□□ -1.65
APC1	YNL172W	KTR2	P33550	425 aa		4.72	□□□□□ -1.65
APC1	YNL172W	YKL151C	P36059	337 aa		4.72	□□□□□ -1.65
APC1	YNL172W	HMT1	P38074	348 aa		4.72	□□□□□ -1.65
APC1	YNL172W	YMR124W	P39523	943 aa	Known RBP	4.72	□□□□□ -1.65
APC1	YNL172W	DAN4	P47179	1161 aa		4.72	□□□□□ -1.65
APC1	YNL172W	YNL108C	P53929	270 aa		4.72	□□□□□ -1.65
APC1	YNL172W	ADA2	Q02336	434 aa		4.72	□□□□□ -1.65
APC1	YNL172W	TFC6	Q06339	672 aa		4.72	□□□□□ -1.65
APC1	YNL172W	MPD2	Q99316	277 aa		4.72	□□□□□ -1.65
APC1	YNL172W	YER152C	P10356	443 aa		4.72	□□□□□ -1.65
APC1	YNL172W	POA1	P38218	177 aa		4.72	□□□□□ -1.65
APC1	YNL172W	STT3	P39007	718 aa	Known RBP	4.72	□□□□□ -1.65
APC1	YNL172W	YJL171C	P46992	396 aa		4.72	□□□□□ -1.65
APC1	YNL172W	UTP8	P53276	713 aa	Known RBP	4.72	□□□□□ -1.65
APC1	YNL172W	PTA1	Q01329	785 aa	Predicted RBP	4.72	□□□□□ -1.65
APC1	YNL172W	GIS4	Q04233	774 aa		4.72	□□□□□ -1.65
APC1	YNL172W	ADK2	P26364	225 aa		4.72	□□□□□ -1.65
APC1	YNL172W	KIP1	P28742	1111 aa		4.72	□□□□□ -1.65
APC1	YNL172W	FIS1	P40515	155 aa		4.72	□□□□□ -1.65
APC1	YNL172W	RNR4	P49723	345 aa	Known RBP	4.72	□□□□□ -1.65
APC1	YNL172W	RSC4	Q02206	625 aa		4.72	□□□□□ -1.65
APC1	YNL172W	DSE3	Q08729	430 aa		4.72	□□□□□ -1.65
APC1	YNL172W	OLA1	P38219	394 aa	Known RBP	4.72	□□□□□ -1.65
APC1	YNL172W	BNA5	Q05979	453 aa		4.72	□□□□□ -1.65
APC1	YNL172W	ECM7	Q06200	448 aa		4.72	□□□□□ -1.65
APC1	YNL172W	ATG9	Q12142	997 aa		4.72	□□□□□ -1.65
APC1	YNL172W	HIS4	P00815	799 aa	Known RBP	4.71	□□□□□ -1.65
APC1	YNL172W	STB6	P36085	766 aa		4.71	□□□□□ -1.65
APC1	YNL172W	RAD55	P38953	406 aa		4.71	□□□□□ -1.65
APC1	YNL172W	YPL277C	Q08989	487 aa		4.71	□□□□□ -1.65
APC1	YNL172W	YDL206W	Q12424	762 aa		4.71	□□□□□ -1.65
APC1	YNL172W	CDC15	P27636	974 aa		4.71	□□□□□ -1.66
APC1	YNL172W	SWI3	P32591	825 aa		4.71	□□□□□ -1.66
APC1	YNL172W	PAN5	P38787	379 aa		4.71	□□□□□ -1.66
APC1	YNL172W	FAU1	P40099	211 aa		4.71	□□□□□ -1.66
APC1	YNL172W	MKT1	P40850	830 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	SBE2	P42223	864 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	PPN1	Q04119	674 aa		4.71	□□□□□ -1.66
APC1	YNL172W	GFD1	Q04839	188 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	THI20	Q08224	551 aa		4.71	□□□□□ -1.66
APC1	YNL172W	TOM70	P07213	617 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	COQ1	P18900	473 aa		4.71	□□□□□ -1.66
APC1	YNL172W	SKT5	P34226	696 aa		4.71	□□□□□ -1.66
APC1	YNL172W	UBA2	P52488	636 aa		4.71	□□□□□ -1.66
APC1	YNL172W	KRE33	P53914	1056 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	DUS3	Q06053	668 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	LEA1	Q08963	238 aa	Predicted RBP	4.71	□□□□□ -1.66
APC1	YNL172W	SEC39	Q12745	709 aa		4.71	□□□□□ -1.66
APC1	YNL172W	MET6	P05694	767 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	CDC37	P06101	506 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	RPS6A	P0CX37	236 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	RPS6B	P0CX38	236 aa	Predicted RBP	4.71	□□□□□ -1.66
APC1	YNL172W	GFA1	P14742	717 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	HEL1	P36113	551 aa		4.71	□□□□□ -1.66
APC1	YNL172W	SLX8	P40072	274 aa		4.71	□□□□□ -1.66
APC1	YNL172W	ATH1	P48016	1211 aa		4.71	□□□□□ -1.66
APC1	YNL172W	ARH1	P48360	493 aa		4.71	□□□□□ -1.66
APC1	YNL172W	PRP24	P49960	444 aa	Known RBP	4.71	□□□□□ -1.66
APC1	YNL172W	TY4B-P	A0A0B7P3V8	1104 aa		4.7	□□□□□ -1.66
APC1	YNL172W	CBP3	P21560	335 aa		4.7	□□□□□ -1.66
APC1	YNL172W	TFB3	Q03290	321 aa		4.7	□□□□□ -1.66
APC1	YNL172W	HMI1	Q12039	706 aa		4.7	□□□□□ -1.66
APC1	YNL172W	ELG1	Q12050	791 aa		4.7	□□□□□ -1.66
APC1	YNL172W	MST1	P07236	462 aa		4.7	□□□□□ -1.66
APC1	YNL172W	APL1	P27351	700 aa		4.7	□□□□□ -1.66
APC1	YNL172W	SRB4	P32569	687 aa		4.7	□□□□□ -1.66
APC1	YNL172W	SLA1	P32790	1244 aa		4.7	□□□□□ -1.66
APC1	YNL172W	SEG2	P34250	1132 aa		4.7	□□□□□ -1.66
APC1	YNL172W	VPS21	P36017	210 aa	Known RBP	4.7	□□□□□ -1.66
APC1	YNL172W	TBF1	Q02457	562 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms