RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	RAD53	P22216	821 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
SWS2	YNL081C	OAR1	P35731	278 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	BUL1	P48524	976 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	AMA1	P50082	593 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	ASI2	P53895	289 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	TIM44	Q01852	431 aa		4.18	□□□□□ -1.74
SWS2	YNL081C	LRS4	Q04087	347 aa	Known RBP	4.18	□□□□□ -1.74
SWS2	YNL081C	DIF1	O13577	133 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	PPR1	P07272	904 aa	Predicted RBP	4.17	□□□□□ -1.74
SWS2	YNL081C	CAF20	P12962	161 aa	Known RBP	4.17	□□□□□ -1.74
SWS2	YNL081C	YCL002C	P25565	263 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	SPC29	P33419	253 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	SAK1	P38990	1142 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	RLP7	P40693	322 aa	Known RBP	4.17	□□□□□ -1.74
SWS2	YNL081C	UBA2	P52488	636 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	RPN4	Q03465	531 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	ACF2	Q12168	779 aa		4.17	□□□□□ -1.74
SWS2	YNL081C	OCA5	P38738	679 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	GDH3	P39708	457 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	ELO3	P40319	345 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	FKH2	P41813	862 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	OSW7	P43611	510 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	HSV2	P50079	448 aa	Predicted RBP	4.16	□□□□□ -1.74
SWS2	YNL081C	MUS81	Q04149	632 aa	Predicted RBP	4.16	□□□□□ -1.74
SWS2	YNL081C	PPM2	Q08282	695 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	THI21	Q08975	551 aa		4.16	□□□□□ -1.74
SWS2	YNL081C	YLR415C	O13578	112 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	MOH1	P38191	138 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	ALY2	P47029	1046 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	MTR3	P48240	250 aa	Predicted RBP	4.15	□□□□□ -1.75
SWS2	YNL081C	NRG1	Q03125	231 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	OMS1	Q06668	471 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	FRE5	Q08908	694 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	YBR182C-A	Q8TGU6	64 aa		4.15	□□□□□ -1.75
SWS2	YNL081C	GSY1	P23337	708 aa		4.14	□□□□□ -1.75
SWS2	YNL081C	DAS1	P47005	663 aa		4.14	□□□□□ -1.75
SWS2	YNL081C	ZIP2	P53061	704 aa		4.14	□□□□□ -1.75
SWS2	YNL081C	PRP4	P20053	465 aa	Known RBP	4.13	□□□□□ -1.75
SWS2	YNL081C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SWS2	YNL081C	YBR259W	P38338	688 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	RPN10	P38886	268 aa	Known RBP	4.13	□□□□□ -1.75
SWS2	YNL081C	YIR042C	P40586	236 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	PFA3	P42836	336 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	MUP1	P50276	574 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	YBP2	P53169	641 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	ORC1	P54784	914 aa	Predicted RBP	4.13	□□□□□ -1.75
SWS2	YNL081C	MCH5	Q08777	521 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	YLR125W	Q12138	136 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	TAD3	Q9URQ3	322 aa		4.13	□□□□□ -1.75
SWS2	YNL081C	PER1	P25625	357 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	STO1	P34160	861 aa	Known RBP	4.12	□□□□□ -1.75
SWS2	YNL081C	MTC2	P34246	357 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	BUD6	P41697	788 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	HXT16	P47185	567 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	STB4	P50104	949 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	CRR1	Q05790	422 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	ADY4	Q05955	493 aa		4.12	□□□□□ -1.75
SWS2	YNL081C	ERR1	P0CX10	437 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	ERR2	P0CX11	437 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	PHO8	P11491	566 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	YHL017W	P38745	532 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	NUP82	P40368	713 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	STU2	P46675	888 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	YMR206W	Q03695	313 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	HBT1	Q07653	1046 aa	Known RBP	4.11	□□□□□ -1.75
SWS2	YNL081C	TRM13	Q12383	476 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	ATG11	Q12527	1178 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	MDM12	Q92328	271 aa		4.11	□□□□□ -1.75
SWS2	YNL081C	LAT1	P12695	482 aa	Known RBP	4.1	□□□□□ -1.75
SWS2	YNL081C	TIM23	P32897	222 aa		4.1	□□□□□ -1.75
SWS2	YNL081C	YFL052W	P43551	465 aa		4.1	□□□□□ -1.75
SWS2	YNL081C	CAF16	P43569	289 aa		4.1	□□□□□ -1.75
SWS2	YNL081C	TY4A-J	P47023	414 aa		4.1	□□□□□ -1.75
SWS2	YNL081C	MRPS35	P53292	345 aa		4.1	□□□□□ -1.75
SWS2	YNL081C	ORC4	P54791	529 aa		4.1	□□□□□ -1.75
SWS2	YNL081C	THI4	P32318	326 aa		4.09	□□□□□ -1.75
SWS2	YNL081C	PPS1	P38148	807 aa		4.09	□□□□□ -1.75
SWS2	YNL081C	ECM1	P39715	212 aa		4.09	□□□□□ -1.75
SWS2	YNL081C	NPY1	P53164	384 aa		4.09	□□□□□ -1.75
SWS2	YNL081C	SNP1	Q00916	300 aa	Predicted RBP	4.09	□□□□□ -1.75
SWS2	YNL081C	UGO1	Q03327	502 aa		4.09	□□□□□ -1.75
SWS2	YNL081C	TMN2	Q04562	672 aa		4.09	□□□□□ -1.75
SWS2	YNL081C	MCD4	P36051	919 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	YBR053C	P38235	358 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	SIC1	P38634	284 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	DSS1	P39112	969 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	YJL163C	P46996	555 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	BNA2	P47125	453 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	MAL11	P53048	616 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	RIA1	P53893	1110 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	POB3	Q04636	552 aa	Known RBP	4.08	□□□□□ -1.76
SWS2	YNL081C	GAD1	Q04792	585 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	FPR4	Q06205	392 aa	Predicted RBP	4.08	□□□□□ -1.76
SWS2	YNL081C	TGL5	Q12043	749 aa		4.08	□□□□□ -1.76
SWS2	YNL081C	CDC9	P04819	755 aa		4.07	□□□□□ -1.76
SWS2	YNL081C	MSH2	P25847	964 aa		4.07	□□□□□ -1.76
SWS2	YNL081C	HIS7	P33734	552 aa	Known RBP	4.07	□□□□□ -1.76
SWS2	YNL081C	PEX6	P33760	1030 aa		4.07	□□□□□ -1.76
SWS2	YNL081C	HSL7	P38274	827 aa		4.07	□□□□□ -1.76

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