RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	CEF1	Q03654	590 aa	Predicted RBP	13.29	□□□□□ -0.28
SIS1	YNL007C	RRB1	Q04225	511 aa	Known RBP	13.29	□□□□□ -0.28
SIS1	YNL007C	SIL1	Q08199	421 aa		13.29	□□□□□ -0.28
SIS1	YNL007C	KIP1	P28742	1111 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	RME1	P32338	300 aa	Known RBP	13.28	□□□□□ -0.28
SIS1	YNL007C	RAD54	P32863	898 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	SMF1	P38925	575 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	NPP2	P39997	493 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	CUL3	P53202	744 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	TPO2	P53283	614 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	MAL13	P53338	473 aa		13.28	□□□□□ -0.28
SIS1	YNL007C	MAS2	P11914	482 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	POX1	P13711	748 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	KIN82	P25341	720 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	FLR1	P38124	548 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	MSC7	P38694	644 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	TCB2	P48231	1178 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	ORC5	P50874	479 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	SHE10	P53075	577 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	TBF1	Q02457	562 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	YMR114C	Q04471	368 aa	Known RBP	13.27	□□□□□ -0.29
SIS1	YNL007C	RGA2	Q06407	1009 aa		13.27	□□□□□ -0.29
SIS1	YNL007C	SPT2	P06843	333 aa	Predicted RBP	13.26	□□□□□ -0.29
SIS1	YNL007C	CBF2	P32504	956 aa		13.26	□□□□□ -0.29
SIS1	YNL007C	TIM23	P32897	222 aa		13.26	□□□□□ -0.29
SIS1	YNL007C	BYE1	P36106	594 aa		13.26	□□□□□ -0.29
SIS1	YNL007C	GUA1	P38625	525 aa	Known RBP	13.26	□□□□□ -0.29
SIS1	YNL007C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	13.26	□□□□□ -0.29	RIP-Chip
SIS1	YNL007C	YGR021W	P53212	290 aa		13.26	□□□□□ -0.29
SIS1	YNL007C	HIF1	Q12373	385 aa		13.26	□□□□□ -0.29
SIS1	YNL007C	SMY2	P32909	740 aa	Known RBP	13.25	□□□□□ -0.29
SIS1	YNL007C	YKL050C	P35736	922 aa		13.25	□□□□□ -0.29
SIS1	YNL007C	ASN1	P49089	572 aa	Known RBP	13.25	□□□□□ -0.29
SIS1	YNL007C	ENV11	P53246	860 aa		13.25	□□□□□ -0.29
SIS1	YNL007C	OSH2	Q12451	1283 aa		13.25	□□□□□ -0.29
SIS1	YNL007C	SNF1	P06782	633 aa	Known RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	CDC33	P07260	213 aa	Known RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	HEM1	P09950	548 aa	Predicted RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	ERG11	P10614	530 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	PAP1	P29468	568 aa	Known RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	CDC11	P32458	415 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	DPH2	P32461	534 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	SWI3	P32591	825 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	LTV1	P34078	463 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	RRP1	P35178	278 aa	Predicted RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	TRZ1	P36159	838 aa	Predicted RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	VID24	P38263	362 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	EXO5	P38289	585 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	BTN2	P53286	410 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	RPA49	Q01080	415 aa	Predicted RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	IWR1	Q07532	353 aa	Predicted RBP	13.24	□□□□□ -0.29
SIS1	YNL007C	HFI1	Q12060	488 aa		13.24	□□□□□ -0.29
SIS1	YNL007C	GFA1	P14742	717 aa	Known RBP	13.23	□□□□□ -0.29
SIS1	YNL007C	IME1	P21190	360 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	CCT4	P39078	528 aa	Known RBP	13.23	□□□□□ -0.29
SIS1	YNL007C	JJJ3	P47138	172 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	SGM1	P47166	707 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	KAP114	P53067	1004 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	CWC22	P53333	577 aa	Known RBP	13.23	□□□□□ -0.29
SIS1	YNL007C	JJJ1	P53863	590 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	SYH1	Q02875	849 aa	Known RBP	13.23	□□□□□ -0.29
SIS1	YNL007C	TRS130	Q03660	1102 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	YDR524C-B	Q3E6R4	66 aa		13.23	□□□□□ -0.29
SIS1	YNL007C	DAL2	P25335	343 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	MRX3	P38172	270 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	FTR1	P40088	404 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	CPR7	P47103	393 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	DAK1	P54838	584 aa	Known RBP	13.22	□□□□□ -0.29
SIS1	YNL007C	YMR018W	Q04364	514 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	ECM7	Q06200	448 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	ATG23	Q06671	453 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	SHS1	Q07657	551 aa		13.22	□□□□□ -0.29
SIS1	YNL007C	YMR084W	A2P2R3	262 aa		13.21	□□□□□ -0.29
SIS1	YNL007C	NAT1	P12945	854 aa	Known RBP	13.21	□□□□□ -0.29
SIS1	YNL007C	TMT1	P32643	299 aa		13.21	□□□□□ -0.29
SIS1	YNL007C	GPT2	P36148	743 aa		13.21	□□□□□ -0.29
SIS1	YNL007C	PSY2	P40164	858 aa		13.21	□□□□□ -0.29
SIS1	YNL007C	VPS70	P47161	811 aa		13.21	□□□□□ -0.29
SIS1	YNL007C	DIG1	Q03063	452 aa	Known RBP	13.21	□□□□□ -0.29
SIS1	YNL007C	POB3	Q04636	552 aa	Known RBP	13.21	□□□□□ -0.29
SIS1	YNL007C	MOT1	P32333	1867 aa		13.21	□□□□□ -0.3
SIS1	YNL007C	RPO26	P20435	155 aa		13.2	□□□□□ -0.3
SIS1	YNL007C	BLI1	P35727	113 aa		13.2	□□□□□ -0.3
SIS1	YNL007C	SAD1	P43589	448 aa		13.2	□□□□□ -0.3
SIS1	YNL007C	MNP1	P53163	194 aa	Predicted RBP	13.2	□□□□□ -0.3
SIS1	YNL007C	MSC2	Q03455	724 aa		13.2	□□□□□ -0.3
SIS1	YNL007C	STE20	Q03497	939 aa	Known RBP	13.2	□□□□□ -0.3
SIS1	YNL007C	LDB19	Q12502	818 aa		13.2	□□□□□ -0.3
SIS1	YNL007C	RTP1	Q12751	981 aa		13.2	□□□□□ -0.3
SIS1	YNL007C	WHI2	P12611	486 aa		13.19	□□□□□ -0.3
SIS1	YNL007C	SEC21	P32074	935 aa	Known RBP	13.19	□□□□□ -0.3
SIS1	YNL007C	CSG2	P35206	410 aa		13.19	□□□□□ -0.3
SIS1	YNL007C	GRS1	P38088	690 aa	Known RBP	13.19	□□□□□ -0.3
SIS1	YNL007C	MMS4	P38257	691 aa		13.19	□□□□□ -0.3
SIS1	YNL007C	MAD1	P40957	749 aa		13.19	□□□□□ -0.3
SIS1	YNL007C	DRN1	P53255	507 aa	Known RBP	13.19	□□□□□ -0.3
SIS1	YNL007C	ATG11	Q12527	1178 aa		13.19	□□□□□ -0.3
SIS1	YNL007C	CDC42	P19073	191 aa		13.18	□□□□□ -0.3
SIS1	YNL007C	RRN6	P32786	894 aa		13.18	□□□□□ -0.3
SIS1	YNL007C	SKG6	P32900	734 aa	Predicted RBP	13.18	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms