RNA–Protein interactions for RNA: YLR466W

YRF1-4, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeast

Gene YRF1-4, Length 4,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRF1-4	YLR466W	SYH1	Q02875	849 aa	Known RBP	6.1	□□□□□ -1.43
YRF1-4	YLR466W	RGA2	Q06407	1009 aa		6.1	□□□□□ -1.43
YRF1-4	YLR466W	HXT1	P32465	570 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	HIS2	P38635	335 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	BTN2	P53286	410 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	EEB1	Q02891	456 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	YDR090C	Q03193	310 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	POB3	Q04636	552 aa	Known RBP	6.09	□□□□□ -1.43
YRF1-4	YLR466W	FAL1	Q12099	399 aa	Known RBP	6.09	□□□□□ -1.43
YRF1-4	YLR466W	YEL1	P34225	687 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	VPS29	P38759	282 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	FIG4	P42837	879 aa		6.09	□□□□□ -1.43
YRF1-4	YLR466W	MAS2	P11914	482 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	SPO16	P17122	198 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	PAP1	P29468	568 aa	Known RBP	6.09	□□□□□ -1.44
YRF1-4	YLR466W	DBF4	P32325	704 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	PAH1	P32567	862 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	SWI3	P32591	825 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	UBP11	P36026	717 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	VPS41	P38959	992 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	ALD5	P40047	520 aa	Known RBP	6.09	□□□□□ -1.44
YRF1-4	YLR466W	NOP6	Q07623	225 aa	Known RBP	6.09	□□□□□ -1.44
YRF1-4	YLR466W	MAM3	Q12296	706 aa		6.09	□□□□□ -1.44
YRF1-4	YLR466W	WHI2	P12611	486 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	KIP1	P28742	1111 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	TIF5	P38431	405 aa	Known RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	CCC2	P38995	1004 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	MIC19	P43594	170 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	RTT102	P53330	157 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	STE20	Q03497	939 aa	Known RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	WHI4	Q07655	649 aa	Known RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	TDA3	P38758	523 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	NCS6	P53088	359 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	YGL039W	P53183	348 aa	Known RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	MRS2	Q01926	470 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	MSC2	Q03455	724 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	STE23	Q06010	1027 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	AIM41	Q12032	185 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	KGD2	P19262	463 aa	Predicted RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	RRN6	P32786	894 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	RAD54	P32863	898 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	PGM2	P37012	569 aa	Known RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	GDT1	P38301	280 aa	Predicted RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	NPP2	P39997	493 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	FTR1	P40088	404 aa		6.08	□□□□□ -1.44
YRF1-4	YLR466W	SBE2	P42223	864 aa	Known RBP	6.08	□□□□□ -1.44
YRF1-4	YLR466W	TUP1	P16649	713 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	TRZ1	P36159	838 aa	Predicted RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	MRX3	P38172	270 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	EXO5	P38289	585 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	SET5	P38890	526 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
YRF1-4	YLR466W	YTA12	P40341	825 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	UTP6	Q02354	440 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	VTC3	Q02725	835 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	ECI1	Q05871	280 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	UBP5	P39944	805 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	RPS7B	P48164	190 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	YNL134C	P53912	376 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	RPA49	Q01080	415 aa	Predicted RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	IWR1	Q07532	353 aa	Predicted RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
YRF1-4	YLR466W	NAM7	P30771	971 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	RME1	P32338	300 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	ERC1	P38767	581 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	KAP123	P40069	1113 aa	Known RBP	6.07	□□□□□ -1.44
YRF1-4	YLR466W	AVT1	P47082	602 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	SEY1	Q99287	776 aa		6.07	□□□□□ -1.44
YRF1-4	YLR466W	YLR462W	O13556	202 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	TRP2	P00899	507 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	SPT2	P06843	333 aa	Predicted RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	NAT1	P12945	854 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	DPH2	P32461	534 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	TRM2	P33753	639 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	MUD2	P36084	527 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	RGD1	P38339	666 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	YHL049C	P38722	271 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	YEL075C	P39972	122 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	YER189W	P40104	122 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	LCB2	P40970	561 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	YFL064C	P43540	174 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	TAM41	P53230	385 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	DRN1	P53255	507 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	ARK1	P53974	638 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	SLX4	Q12098	748 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	YBL111C	Q3E7Y5	667 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	LDH1	P38139	375 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	ECM2	P38241	364 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	RCK2	P38623	610 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	CPR6	P53691	371 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
YRF1-4	YLR466W	POX1	P13711	748 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	MMS4	P38257	691 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	RRT2	P38332	387 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	YGR111W	P53265	400 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	SHS1	Q07657	551 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	SPO21	Q12411	609 aa		6.06	□□□□□ -1.44
YRF1-4	YLR466W	EFB1	P32471	206 aa	Known RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	LAS1	P36146	502 aa	Predicted RBP	6.06	□□□□□ -1.44
YRF1-4	YLR466W	CCL1	P37366	393 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms