RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	PKP1	P40530	394 aa		5.31	□□□□□ -1.56
SEC39	YLR440C	YFL066C	P43538	392 aa		5.31	□□□□□ -1.56
SEC39	YLR440C	CTH1	P47976	325 aa		5.31	□□□□□ -1.56
SEC39	YLR440C	FPK1	P53739	893 aa		5.31	□□□□□ -1.56
SEC39	YLR440C	RPM2	Q02773	1202 aa		5.31	□□□□□ -1.56
SEC39	YLR440C	NOP6	Q07623	225 aa	Known RBP	5.31	□□□□□ -1.56
SEC39	YLR440C	SMF3	Q12078	473 aa	Predicted RBP	5.31	□□□□□ -1.56
SEC39	YLR440C	COB	P00163	385 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ERG12	P07277	443 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ILS1	P09436	1072 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	YKL063C	P35725	167 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	YKL133C	P36066	463 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	POP7	P38291	140 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	RTC3	P38804	111 aa	Predicted RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	GCN20	P43535	752 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	FYV8	P46949	817 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	YJR107W	P47145	328 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ALT1	P52893	592 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	CAF130	P53280	1122 aa	Predicted RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	IVY1	Q04934	453 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	CST9	Q06032	482 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	REH1	Q06709	432 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	HO	P09932	586 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	IDI1	P15496	288 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	OM45	P16547	393 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ATP3	P38077	311 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	SAK1	P38990	1142 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ZRG8	P40021	1076 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	RLP7	P40693	322 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	XKS1	P42826	600 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	STU2	P46675	888 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ECL1	P48235	211 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ORM1	P53224	222 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ATF2	P53296	535 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	FYV6	P53913	173 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ERV25	P54837	211 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	YML083C	Q04526	418 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	SPC2	Q04969	178 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	PHO92	Q06390	306 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	OPY2	Q06810	360 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
SEC39	YLR440C	GYP1	Q08484	637 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	WRS1	Q12109	432 aa	Known RBP	5.3	□□□□□ -1.56
SEC39	YLR440C	BUG1	Q12191	341 aa		5.3	□□□□□ -1.56
SEC39	YLR440C	ARG81	P05085	880 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	LCB1	P25045	558 aa	Known RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	LYP1	P32487	611 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	SSE1	P32589	693 aa	Known RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	YKR075C	P36155	307 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	BOI1	P38041	980 aa	Known RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	TOM22	P49334	152 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	SPC105	P53148	917 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	YGR266W	P53326	701 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	ASI1	P54074	624 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	HOT1	Q03213	719 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	TRS130	Q03660	1102 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	VAM6	Q07468	1049 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	PSR2	Q07949	397 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	APL4	Q12028	832 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	IOC2	Q12072	812 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	CIT1	P00890	479 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	HCA4	P20448	770 aa	Known RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	KAR9	P32526	644 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	RPC34	P32910	317 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	HSP78	P33416	811 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	CPR5	P35176	225 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	YPT52	P36018	234 aa	Known RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	UBP11	P36026	717 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	ALG14	P38242	237 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	CCZ1	P38273	704 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	MSG5	P38590	489 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	VPS45	P38932	577 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	GEM1	P39722	662 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	YJR061W	P40355	935 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	NUP82	P40368	713 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	AGE2	P40529	298 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	ROG3	P43602	733 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	BNA6	P43619	295 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	AIP1	P46680	615 aa	Known RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	ALB1	P47019	175 aa	Predicted RBP	5.29	□□□□□ -1.56
SEC39	YLR440C	YGL140C	P53120	1219 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	GCR2	Q01722	534 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	YMR102C	Q03177	834 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	ICL2	Q12031	575 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	AHC1	Q12433	566 aa		5.29	□□□□□ -1.56
SEC39	YLR440C	YRF1-3	P0CX14	1859 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	YRF1-7	P0CX15	1859 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	YRF1-6	P53819	1859 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	FUR4	P05316	633 aa	Known RBP	5.28	□□□□□ -1.56
SEC39	YLR440C	SPO16	P17122	198 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	MRPS28	P21771	286 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	MEI5	P32489	222 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	RPN2	P32565	945 aa	Known RBP	5.28	□□□□□ -1.56
SEC39	YLR440C	TFC4	P33339	1025 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	ARL1	P38116	183 aa	Known RBP	5.28	□□□□□ -1.56
SEC39	YLR440C	ALG3	P38179	458 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	PBY1	P38254	753 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	RRM3	P38766	723 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	SMF2	P38778	549 aa		5.28	□□□□□ -1.56
SEC39	YLR440C	GPP1	P41277	250 aa	Known RBP	5.28	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms