RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W ALY2P47029 1046 aa4.81□□□□□ -1.64
VPS38YLR360W RNH70P53331 553 aa4.81□□□□□ -1.64
VPS38YLR360W SLU7Q02775 382 aaKnown RBP4.81□□□□□ -1.64
VPS38YLR360W CRR1Q05790 422 aa4.81□□□□□ -1.64
VPS38YLR360W VBA3P25594 458 aa4.8□□□□□ -1.64
VPS38YLR360W HRR25P29295 494 aaKnown RBP4.8□□□□□ -1.64
VPS38YLR360W PMI40P29952 429 aaKnown RBP4.8□□□□□ -1.64
VPS38YLR360W YBR182C-AQ8TGU6 64 aa4.8□□□□□ -1.64
VPS38YLR360W MDM12Q92328 271 aa4.8□□□□□ -1.64
VPS38YLR360W CDC9P04819 755 aa4.79□□□□□ -1.64
VPS38YLR360W TUB3P09734 445 aaKnown RBP4.79□□□□□ -1.64
VPS38YLR360W MSH2P25847 964 aa4.79□□□□□ -1.64
VPS38YLR360W DEF1P35732 738 aaKnown RBP4.79□□□□□ -1.64
VPS38YLR360W MSE1P48525 536 aa4.79□□□□□ -1.64
VPS38YLR360W SUN4P53616 420 aa4.79□□□□□ -1.64
VPS38YLR360W PKH1Q03407 766 aa4.79□□□□□ -1.64
VPS38YLR360W POB3Q04636 552 aaKnown RBP4.79□□□□□ -1.64
VPS38YLR360W GSF2Q04697 403 aaKnown RBP4.79□□□□□ -1.64
VPS38YLR360W URN1Q06525 465 aaKnown RBP4.79□□□□□ -1.64
VPS38YLR360W THI21Q08975 551 aa4.79□□□□□ -1.64
VPS38YLR360W PEX6P33760 1030 aa4.78□□□□□ -1.64
VPS38YLR360W STO1P34160 861 aaKnown RBP4.78□□□□□ -1.64
VPS38YLR360W MTC2P34246 357 aa4.78□□□□□ -1.64
VPS38YLR360W RPP1P38786 293 aa4.78□□□□□ -1.64
VPS38YLR360W AIM21P40563 679 aa4.78□□□□□ -1.64
VPS38YLR360W ASI2P53895 289 aa4.78□□□□□ -1.64
VPS38YLR360W MUS81Q04149 632 aaPredicted RBP4.78□□□□□ -1.64
VPS38YLR360W TRM11Q12463 433 aa4.78□□□□□ -1.64
VPS38YLR360W PRP4P20053 465 aaKnown RBP4.77□□□□□ -1.65
VPS38YLR360W MEF1P25039 761 aa4.77□□□□□ -1.65
VPS38YLR360W EFT1P32324 842 aaKnown RBP4.77□□□□□ -1.65
VPS38YLR360W NGG1P32494 702 aa4.77□□□□□ -1.65
VPS38YLR360W CTF13P35203 478 aa4.77□□□□□ -1.65
VPS38YLR360W RPN10P38886 268 aaKnown RBP4.77□□□□□ -1.65
VPS38YLR360W HXT16P47185 567 aa4.77□□□□□ -1.65
VPS38YLR360W MTR3P48240 250 aaPredicted RBP4.77□□□□□ -1.65
VPS38YLR360W KIN4Q01919 800 aa4.77□□□□□ -1.65
VPS38YLR360W UGO1Q03327 502 aa4.77□□□□□ -1.65
VPS38YLR360W PUS9Q12069 462 aa4.77□□□□□ -1.65
VPS38YLR360W TRP4P07285 380 aaPredicted RBP4.76□□□□□ -1.65
VPS38YLR360W MCD4P36051 919 aa4.76□□□□□ -1.65
VPS38YLR360W FKH2P41813 862 aa4.76□□□□□ -1.65
VPS38YLR360W ZIP2P53061 704 aa4.76□□□□□ -1.65
VPS38YLR360W ALG12P53730 551 aa4.76□□□□□ -1.65
VPS38YLR360W ERG4P25340 473 aa4.75□□□□□ -1.65
VPS38YLR360W SUL1P38359 859 aa4.75□□□□□ -1.65
VPS38YLR360W PFA3P42836 336 aa4.75□□□□□ -1.65
VPS38YLR360W CAF16P43569 289 aa4.75□□□□□ -1.65
VPS38YLR360W YDR338CQ05497 695 aa4.75□□□□□ -1.65
VPS38YLR360W NTG2Q08214 380 aa4.75□□□□□ -1.65
VPS38YLR360W PNS1Q12412 539 aa4.75□□□□□ -1.65
VPS38YLR360W RAD18P10862 487 aa4.74□□□□□ -1.65
VPS38YLR360W RRP14P36080 434 aaKnown RBP4.74□□□□□ -1.65
VPS38YLR360W YFL052WP43551 465 aa4.74□□□□□ -1.65
VPS38YLR360W BUL1P48524 976 aa4.74□□□□□ -1.65
VPS38YLR360W ERG5P54781 538 aa4.74□□□□□ -1.65
VPS38YLR360W SNP1Q00916 300 aaPredicted RBP4.74□□□□□ -1.65
VPS38YLR360W ASM4Q05166 528 aa4.74□□□□□ -1.65
VPS38YLR360W YLR040CQ07988 224 aa4.74□□□□□ -1.65
VPS38YLR360W YLR415CO13578 112 aa4.73□□□□□ -1.65
VPS38YLR360W MET3P08536 511 aa4.73□□□□□ -1.65
VPS38YLR360W SRD1P09007 221 aa4.73□□□□□ -1.65
VPS38YLR360W KTR4P38131 464 aa4.73□□□□□ -1.65
VPS38YLR360W NPY1P53164 384 aa4.73□□□□□ -1.65
VPS38YLR360W MRPS35P53292 345 aa4.73□□□□□ -1.65
VPS38YLR360W ORC1P54784 914 aaPredicted RBP4.73□□□□□ -1.65
VPS38YLR360W DLT1Q04216 342 aa4.73□□□□□ -1.65
VPS38YLR360W NMD2P38798 1089 aaKnown RBP4.72□□□□□ -1.65
VPS38YLR360W NRG1Q03125 231 aa4.72□□□□□ -1.65
VPS38YLR360W NHX1Q04121 633 aa4.72□□□□□ -1.65
VPS38YLR360W TRM13Q12383 476 aa4.72□□□□□ -1.65
VPS38YLR360W CAF20P12962 161 aaKnown RBP4.72□□□□□ -1.65
VPS38YLR360W ELO3P40319 345 aa4.72□□□□□ -1.65
VPS38YLR360W YBP2P53169 641 aa4.72□□□□□ -1.65
VPS38YLR360W RNT1Q02555 471 aa4.72□□□□□ -1.65
VPS38YLR360W YOL073CQ08232 322 aa4.72□□□□□ -1.65
VPS38YLR360W Q0142Q9ZZW4 58 aa4.72□□□□□ -1.65
VPS38YLR360W ALG7P07286 448 aa4.71□□□□□ -1.66
VPS38YLR360W HOG1P32485 435 aa4.71□□□□□ -1.66
VPS38YLR360W HSL7P38274 827 aa4.71□□□□□ -1.66
VPS38YLR360W MNN1P39106 762 aa4.71□□□□□ -1.66
VPS38YLR360W DOT6P40059 670 aaKnown RBP4.71□□□□□ -1.66
VPS38YLR360W MUP1P50276 574 aa4.71□□□□□ -1.66
VPS38YLR360W TFB2Q02939 513 aa4.71□□□□□ -1.66
VPS38YLR360W YMR206WQ03695 313 aa4.71□□□□□ -1.66
VPS38YLR360W YLR149CQ99296 730 aa4.71□□□□□ -1.66
VPS38YLR360W SFP1P32432 683 aa4.7□□□□□ -1.66
VPS38YLR360W BNA2P47125 453 aa4.7□□□□□ -1.66
VPS38YLR360W UBC9P50623 157 aaPredicted RBP4.7□□□□□ -1.66
VPS38YLR360W AIM14P53109 570 aa4.7□□□□□ -1.66
VPS38YLR360W ORC4P54791 529 aa4.7□□□□□ -1.66
VPS38YLR360W FRE5Q08908 694 aa4.7□□□□□ -1.66
VPS38YLR360W YKR051WP36142 418 aa4.69□□□□□ -1.66
VPS38YLR360W PRP31P49704 494 aaPredicted RBP4.69□□□□□ -1.66
VPS38YLR360W AMA1P50082 593 aa4.69□□□□□ -1.66
VPS38YLR360W SLI1P53304 468 aa4.69□□□□□ -1.66
VPS38YLR360W CTF4Q01454 927 aa4.69□□□□□ -1.66
VPS38YLR360W RPN7Q06103 429 aaKnown RBP4.69□□□□□ -1.66
VPS38YLR360W TGL5Q12043 749 aa4.69□□□□□ -1.66
VPS38YLR360W GPR1Q12361 961 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms