RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C ASI2P53895 289 aa5.41□□□□□ -1.54
SMD3YLR147C FPR4Q06205 392 aaPredicted RBP5.41□□□□□ -1.54
SMD3YLR147C RSC3Q06639 885 aa5.41□□□□□ -1.54
SMD3YLR147C TRP4P07285 380 aaPredicted RBP5.4□□□□□ -1.54
SMD3YLR147C MSH2P25847 964 aa5.4□□□□□ -1.54
SMD3YLR147C EFT1P32324 842 aaKnown RBP5.4□□□□□ -1.54
SMD3YLR147C SET5P38890 526 aaKnown RBP5.4□□□□□ -1.54
SMD3YLR147C VHR1P40522 640 aa5.4□□□□□ -1.54
SMD3YLR147C AIM21P40563 679 aa5.4□□□□□ -1.54
SMD3YLR147C RLP7P40693 322 aaKnown RBP5.4□□□□□ -1.54
SMD3YLR147C SSY5P47002 699 aa5.4□□□□□ -1.54
SMD3YLR147C SLI1P53304 468 aa5.4□□□□□ -1.54
SMD3YLR147C MUS81Q04149 632 aaPredicted RBP5.4□□□□□ -1.54
SMD3YLR147C AIM39Q08223 395 aa5.4□□□□□ -1.54
SMD3YLR147C CDC9P04819 755 aa5.39□□□□□ -1.55
SMD3YLR147C MEF1P25039 761 aa5.39□□□□□ -1.55
SMD3YLR147C SAP190P36123 1033 aa5.39□□□□□ -1.55
SMD3YLR147C CHS7P38843 316 aa5.39□□□□□ -1.55
SMD3YLR147C OSW7P43611 510 aa5.39□□□□□ -1.55
SMD3YLR147C YDR338CQ05497 695 aa5.39□□□□□ -1.55
SMD3YLR147C TRM13Q12383 476 aa5.39□□□□□ -1.55
SMD3YLR147C TRM11Q12463 433 aa5.39□□□□□ -1.55
SMD3YLR147C THI4P32318 326 aa5.38□□□□□ -1.55
SMD3YLR147C MCD4P36051 919 aa5.38□□□□□ -1.55
SMD3YLR147C ZDS1P50111 915 aaKnown RBP5.38□□□□□ -1.55
SMD3YLR147C MRPS35P53292 345 aa5.38□□□□□ -1.55
SMD3YLR147C ORC1P54784 914 aaPredicted RBP5.38□□□□□ -1.55
SMD3YLR147C GPR1Q12361 961 aa5.38□□□□□ -1.55
SMD3YLR147C DIF1O13577 133 aa5.37□□□□□ -1.55
SMD3YLR147C ERG4P25340 473 aa5.37□□□□□ -1.55
SMD3YLR147C SAK1P38990 1142 aa5.37□□□□□ -1.55
SMD3YLR147C PZF1P39933 429 aa5.37□□□□□ -1.55
SMD3YLR147C ZIP2P53061 704 aa5.37□□□□□ -1.55
SMD3YLR147C ASM4Q05166 528 aa5.37□□□□□ -1.55
SMD3YLR147C YLR040CQ07988 224 aa5.37□□□□□ -1.55
SMD3YLR147C PEX6P33760 1030 aa5.36□□□□□ -1.55
SMD3YLR147C KTR4P38131 464 aa5.36□□□□□ -1.55
SMD3YLR147C RPP1P38786 293 aa5.36□□□□□ -1.55
SMD3YLR147C SHR5P41912 237 aa5.36□□□□□ -1.55
SMD3YLR147C PFA3P42836 336 aa5.36□□□□□ -1.55
SMD3YLR147C CAF16P43569 289 aa5.36□□□□□ -1.55
SMD3YLR147C ALY2P47029 1046 aa5.36□□□□□ -1.55
SMD3YLR147C RNH70P53331 553 aa5.36□□□□□ -1.55
SMD3YLR147C UGO1Q03327 502 aa5.36□□□□□ -1.55
SMD3YLR147C PNS1Q12412 539 aa5.36□□□□□ -1.55
SMD3YLR147C VBA3P25594 458 aa5.35□□□□□ -1.55
SMD3YLR147C STO1P34160 861 aaKnown RBP5.35□□□□□ -1.55
SMD3YLR147C URN1Q06525 465 aaKnown RBP5.35□□□□□ -1.55
SMD3YLR147C YLR415CO13578 112 aa5.34□□□□□ -1.55
SMD3YLR147C GSY1P23337 708 aa5.34□□□□□ -1.55
SMD3YLR147C DSS1P39112 969 aa5.34□□□□□ -1.55
SMD3YLR147C FKH2P41813 862 aa5.34□□□□□ -1.55
SMD3YLR147C PKH1Q03407 766 aa5.34□□□□□ -1.55
SMD3YLR147C NTG2Q08214 380 aa5.34□□□□□ -1.55
SMD3YLR147C YOL073CQ08232 322 aa5.34□□□□□ -1.55
SMD3YLR147C MET6P05694 767 aaKnown RBP5.33□□□□□ -1.56
SMD3YLR147C RRP14P36080 434 aaKnown RBP5.33□□□□□ -1.56
SMD3YLR147C ALG12P53730 551 aa5.33□□□□□ -1.56
SMD3YLR147C SNP1Q00916 300 aaPredicted RBP5.33□□□□□ -1.56
SMD3YLR147C CTF4Q01454 927 aa5.33□□□□□ -1.56
SMD3YLR147C CRR1Q05790 422 aa5.33□□□□□ -1.56
SMD3YLR147C MIH1P23748 554 aa5.32□□□□□ -1.56
SMD3YLR147C SUL1P38359 859 aa5.32□□□□□ -1.56
SMD3YLR147C POB3Q04636 552 aaKnown RBP5.32□□□□□ -1.56
SMD3YLR147C YLR149CQ99296 730 aa5.32□□□□□ -1.56
SMD3YLR147C ALG7P07286 448 aa5.31□□□□□ -1.56
SMD3YLR147C SRD1P09007 221 aa5.31□□□□□ -1.56
SMD3YLR147C NGG1P32494 702 aa5.31□□□□□ -1.56
SMD3YLR147C MTR3P48240 250 aaPredicted RBP5.31□□□□□ -1.56
SMD3YLR147C MUP1P50276 574 aa5.31□□□□□ -1.56
SMD3YLR147C YBR053CP38235 358 aa5.3□□□□□ -1.56
SMD3YLR147C SIC1P38634 284 aa5.3□□□□□ -1.56
SMD3YLR147C ELO3P40319 345 aa5.3□□□□□ -1.56
SMD3YLR147C BNA2P47125 453 aa5.3□□□□□ -1.56
SMD3YLR147C RNT1Q02555 471 aa5.3□□□□□ -1.56
SMD3YLR147C NRG1Q03125 231 aa5.3□□□□□ -1.56
SMD3YLR147C DLT1Q04216 342 aa5.3□□□□□ -1.56
SMD3YLR147C FRE5Q08908 694 aa5.3□□□□□ -1.56
SMD3YLR147C Q0142Q9ZZW4 58 aa5.3□□□□□ -1.56
SMD3YLR147C PPR1P07272 904 aaPredicted RBP5.29□□□□□ -1.56
SMD3YLR147C MET3P08536 511 aa5.29□□□□□ -1.56
SMD3YLR147C HOG1P32485 435 aa5.29□□□□□ -1.56
SMD3YLR147C PPG1P32838 368 aa5.29□□□□□ -1.56
SMD3YLR147C RPN10P38886 268 aaKnown RBP5.29□□□□□ -1.56
SMD3YLR147C TGL5Q12043 749 aa5.29□□□□□ -1.56
SMD3YLR147C RAD18P10862 487 aa5.28□□□□□ -1.56
SMD3YLR147C CAF20P12962 161 aaKnown RBP5.28□□□□□ -1.56
SMD3YLR147C PCL2P25693 308 aa5.28□□□□□ -1.56
SMD3YLR147C NHX1Q04121 633 aa5.28□□□□□ -1.56
SMD3YLR147C ADY4Q05955 493 aa5.28□□□□□ -1.56
SMD3YLR147C YLR001CQ07895 862 aa5.28□□□□□ -1.56
SMD3YLR147C YKR051WP36142 418 aa5.27□□□□□ -1.57
SMD3YLR147C YBR259WP38338 688 aa5.27□□□□□ -1.57
SMD3YLR147C NMD2P38798 1089 aaKnown RBP5.27□□□□□ -1.57
SMD3YLR147C YFL052WP43551 465 aa5.27□□□□□ -1.57
SMD3YLR147C NPY1P53164 384 aa5.27□□□□□ -1.57
SMD3YLR147C TEX1P53851 422 aaKnown RBP5.27□□□□□ -1.57
SMD3YLR147C YEL1P34225 687 aa5.26□□□□□ -1.57
SMD3YLR147C PPS1P38148 807 aa5.26□□□□□ -1.57
SMD3YLR147C HSL7P38274 827 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 134 ms