RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C PET123P17558 318 aa10.67□□□□□ -0.7
POM34YLR018C KIP1P28742 1111 aa10.67□□□□□ -0.7
POM34YLR018C STO1P34160 861 aaKnown RBP10.67□□□□□ -0.7
POM34YLR018C DRE2P36152 348 aa10.67□□□□□ -0.7
POM34YLR018C TVP23P38962 199 aa10.67□□□□□ -0.7
POM34YLR018C CCC2P38995 1004 aa10.67□□□□□ -0.7
POM34YLR018C CAJ1P39101 391 aa10.67□□□□□ -0.7
POM34YLR018C FTR1P40088 404 aa10.67□□□□□ -0.7
POM34YLR018C APT1P49435 187 aaKnown RBP10.67□□□□□ -0.7
POM34YLR018C RPA49Q01080 415 aaPredicted RBP10.67□□□□□ -0.7
POM34YLR018C SPT2P06843 333 aaPredicted RBP10.66□□□□□ -0.7
POM34YLR018C NAT1P12945 854 aaKnown RBP10.66□□□□□ -0.7
POM34YLR018C RAD54P32863 898 aa10.66□□□□□ -0.7
POM34YLR018C YMR124WP39523 943 aaKnown RBP10.66□□□□□ -0.7
POM34YLR018C CPR7P47103 393 aa10.66□□□□□ -0.7
POM34YLR018C SGM1P47166 707 aa10.66□□□□□ -0.7
POM34YLR018C CLA4P48562 842 aa10.66□□□□□ -0.7
POM34YLR018C ESBP6P53918 673 aa10.66□□□□□ -0.7
POM34YLR018C DOT1Q04089 582 aaKnown RBP10.66□□□□□ -0.7
POM34YLR018C YDR524C-BQ3E6R4 66 aa10.66□□□□□ -0.7
POM34YLR018C ASP3-2P0CX77 362 aa10.65□□□□□ -0.7
POM34YLR018C ASP3-3P0CX78 362 aa10.65□□□□□ -0.7
POM34YLR018C ASP3-4P0CX79 362 aa10.65□□□□□ -0.7
POM34YLR018C ASP3-1P0CZ17 362 aa10.65□□□□□ -0.7
POM34YLR018C SEC23P15303 768 aaKnown RBP10.65□□□□□ -0.7
POM34YLR018C ADE2P21264 571 aaKnown RBP10.65□□□□□ -0.7
POM34YLR018C RAD57P25301 460 aa10.65□□□□□ -0.7
POM34YLR018C PAM1P37304 830 aaKnown RBP10.65□□□□□ -0.7
POM34YLR018C HXT8P40886 569 aa10.65□□□□□ -0.7
POM34YLR018C LAM5P43560 674 aa10.65□□□□□ -0.7
POM34YLR018C DAS1P47005 663 aa10.65□□□□□ -0.7
POM34YLR018C TSR1Q07381 788 aaKnown RBP10.65□□□□□ -0.7
POM34YLR018C TRP2P00899 507 aaKnown RBP10.64□□□□□ -0.71
POM34YLR018C GLN3P18494 730 aa10.64□□□□□ -0.71
POM34YLR018C DAL2P25335 343 aa10.64□□□□□ -0.71
POM34YLR018C EFM4P40516 257 aa10.64□□□□□ -0.71
POM34YLR018C ULI1P43604 169 aa10.64□□□□□ -0.71
POM34YLR018C CWC21Q03375 135 aaKnown RBP10.64□□□□□ -0.71
POM34YLR018C STE20Q03497 939 aaKnown RBP10.64□□□□□ -0.71
POM34YLR018C YLR001CQ07895 862 aa10.64□□□□□ -0.71
POM34YLR018C SGT2Q12118 346 aaKnown RBP10.64□□□□□ -0.71
POM34YLR018C CDC33P07260 213 aaKnown RBP10.63□□□□□ -0.71
POM34YLR018C HEM1P09950 548 aaPredicted RBP10.63□□□□□ -0.71
POM34YLR018C CDC42P19073 191 aa10.63□□□□□ -0.71
POM34YLR018C RRT12P25381 491 aa10.63□□□□□ -0.71
POM34YLR018C TRM2P33753 639 aa10.63□□□□□ -0.71
POM34YLR018C TRZ1P36159 838 aaPredicted RBP10.63□□□□□ -0.71
POM34YLR018C MCX1P38323 520 aaPredicted RBP10.63□□□□□ -0.71
POM34YLR018C UBX7P38349 436 aa10.63□□□□□ -0.71
POM34YLR018C SET5P38890 526 aaKnown RBP10.63□□□□□ -0.71
POM34YLR018C SBE2P42223 864 aaKnown RBP10.63□□□□□ -0.71
POM34YLR018C YNL134CP53912 376 aaKnown RBP10.63□□□□□ -0.71
POM34YLR018C SOV1Q04748 898 aa10.63□□□□□ -0.71
POM34YLR018C ABP140Q08641 628 aaKnown RBP10.63□□□□□ -0.71
POM34YLR018C GIS3Q12418 502 aa10.63□□□□□ -0.71
POM34YLR018C PCD1Q12524 340 aa10.63□□□□□ -0.71
POM34YLR018C POT1P27796 417 aaKnown RBP RIP-Chip data10.62□□□□□ -0.71not detected
POM34YLR018C CSG2P35206 410 aa10.62□□□□□ -0.71
POM34YLR018C PTC4P38089 393 aa10.62□□□□□ -0.71
POM34YLR018C EXO5P38289 585 aa10.62□□□□□ -0.71
POM34YLR018C VPS70P47161 811 aa10.62□□□□□ -0.71
POM34YLR018C GCV2P49095 1034 aa10.62□□□□□ -0.71
POM34YLR018C DRN1P53255 507 aaKnown RBP10.62□□□□□ -0.71
POM34YLR018C YNL115CP53925 644 aa10.62□□□□□ -0.71
POM34YLR018C ALG11P53954 548 aaKnown RBP10.62□□□□□ -0.71
POM34YLR018C PPM1Q04081 328 aa10.62□□□□□ -0.71
POM34YLR018C SNF1P06782 633 aaKnown RBP10.61□□□□□ -0.71
POM34YLR018C YKL050CP35736 922 aa10.61□□□□□ -0.71
POM34YLR018C AVT3P36062 692 aa10.61□□□□□ -0.71
POM34YLR018C YER186CP40101 306 aa10.61□□□□□ -0.71
POM34YLR018C VAC14Q06708 880 aa10.61□□□□□ -0.71
POM34YLR018C SIL1Q08199 421 aa10.61□□□□□ -0.71
POM34YLR018C DAS2Q12084 232 aa10.61□□□□□ -0.71
POM34YLR018C COX11P19516 300 aaKnown RBP10.6□□□□□ -0.71
POM34YLR018C FUB1P25659 250 aa10.6□□□□□ -0.71
POM34YLR018C SRB4P32569 687 aa10.6□□□□□ -0.71
POM34YLR018C RPT1P33299 467 aaKnown RBP10.6□□□□□ -0.71
POM34YLR018C YAP1801P38856 637 aa10.6□□□□□ -0.71
POM34YLR018C ISM1P48526 1002 aa10.6□□□□□ -0.71
POM34YLR018C YPL034WQ03083 165 aa10.6□□□□□ -0.71
POM34YLR018C SML1Q04964 104 aa10.6□□□□□ -0.71
POM34YLR018C CDD1Q06549 142 aa10.6□□□□□ -0.71
POM34YLR018C MCM16Q12262 181 aa10.6□□□□□ -0.71
POM34YLR018C OSH2Q12451 1283 aa10.6□□□□□ -0.71
POM34YLR018C ECM3Q99252 613 aa10.6□□□□□ -0.71
POM34YLR018C AI5_BETAQ9ZZX0 354 aa10.6□□□□□ -0.71
POM34YLR018C RRN6P32786 894 aa10.59□□□□□ -0.71
POM34YLR018C TCD1P38756 429 aa10.59□□□□□ -0.71
POM34YLR018C SAH1P39954 449 aaKnown RBP10.59□□□□□ -0.71
POM34YLR018C KAP123P40069 1113 aaKnown RBP10.59□□□□□ -0.71
POM34YLR018C NDC80P40460 691 aa10.59□□□□□ -0.71
POM34YLR018C BOP3P53958 396 aa10.59□□□□□ -0.71
POM34YLR018C GAL10P04397 699 aa10.58□□□□□ -0.72
POM34YLR018C RNR1P21524 888 aaKnown RBP10.58□□□□□ -0.72
POM34YLR018C SCJ1P25303 377 aa10.58□□□□□ -0.72
POM34YLR018C HXT1P32465 570 aa10.58□□□□□ -0.72
POM34YLR018C BUD2P33314 1104 aa10.58□□□□□ -0.72
POM34YLR018C YHL026CP38740 315 aa10.58□□□□□ -0.72
POM34YLR018C YHR054CP38780 354 aa10.58□□□□□ -0.72
POM34YLR018C DYS1P38791 387 aa10.58□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms