RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W DED1P06634 604 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W RPC31P17890 251 aa2.6□□□□□ -1.99
NUP100YKL068W PCL2P25693 308 aa2.6□□□□□ -1.99
NUP100YKL068W IMP2'P32351 346 aa2.6□□□□□ -1.99
NUP100YKL068W SCD5P34758 872 aa2.6□□□□□ -1.99
NUP100YKL068W TBS1P38114 1094 aa2.6□□□□□ -1.99
NUP100YKL068W ECM2P38241 364 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W BCD1P38772 366 aa2.6□□□□□ -1.99
NUP100YKL068W MXR1P40029 184 aa2.6□□□□□ -1.99
NUP100YKL068W YGL176CP46945 554 aa2.6□□□□□ -1.99
NUP100YKL068W TIM50Q02776 476 aa2.6□□□□□ -1.99
NUP100YKL068W ROD1Q02805 837 aa2.6□□□□□ -1.99
NUP100YKL068W NSE5Q03718 556 aa2.6□□□□□ -1.99
NUP100YKL068W EIS1Q05050 843 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W NBA1Q08229 501 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W PSH1Q12161 406 aa2.6□□□□□ -1.99
NUP100YKL068W RRG1Q12167 365 aaPredicted RBP2.6□□□□□ -1.99
NUP100YKL068W YPL066WQ12194 479 aa2.6□□□□□ -1.99
NUP100YKL068W YPR071WQ12346 211 aa2.6□□□□□ -1.99
NUP100YKL068W DPH6Q12429 685 aa2.6□□□□□ -1.99
NUP100YKL068W HSH49Q99181 213 aaPredicted RBP2.6□□□□□ -1.99
NUP100YKL068W Q0182Q9ZZW1 134 aa2.6□□□□□ -1.99
NUP100YKL068W MSD1P15179 658 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W PHO81P17442 1178 aa2.59□□□□□ -1.99
NUP100YKL068W FUR1P18562 216 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W DHR2P36009 735 aaPredicted RBP2.59□□□□□ -1.99
NUP100YKL068W QRI7P43122 407 aa2.59□□□□□ -1.99
NUP100YKL068W DUG1P43616 481 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W SGM1P47166 707 aa2.59□□□□□ -1.99
NUP100YKL068W YGL140CP53120 1219 aa2.59□□□□□ -1.99
NUP100YKL068W HEL2Q05580 639 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W ECM38Q05902 660 aaPredicted RBP2.59□□□□□ -1.99
NUP100YKL068W RMP1Q12530 201 aa2.59□□□□□ -1.99
NUP100YKL068W TPM1P17536 199 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W AAC3P18238 307 aa2.59□□□□□ -1.99
NUP100YKL068W IRE1P32361 1115 aa2.59□□□□□ -1.99
NUP100YKL068W SLA1P32790 1244 aa2.59□□□□□ -1.99
NUP100YKL068W SHM1P37292 490 aaPredicted RBP2.59□□□□□ -1.99
NUP100YKL068W DYS1P38791 387 aa2.59□□□□□ -1.99
NUP100YKL068W POP2P39008 433 aa2.59□□□□□ -1.99
NUP100YKL068W MAM1P40065 302 aa2.59□□□□□ -1.99
NUP100YKL068W UBP6P43593 499 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W AIM14P53109 570 aa2.59□□□□□ -1.99
NUP100YKL068W PCL10P53124 433 aa2.59□□□□□ -1.99
NUP100YKL068W YNL058CP53947 316 aa2.59□□□□□ -1.99
NUP100YKL068W MOT3P54785 490 aaKnown RBP2.59□□□□□ -1.99
NUP100YKL068W YPL034WQ03083 165 aa2.59□□□□□ -1.99
NUP100YKL068W RBA50Q04418 439 aa2.59□□□□□ -1.99
NUP100YKL068W YTM1Q12024 460 aaPredicted RBP2.59□□□□□ -1.99
NUP100YKL068W SPO21Q12411 609 aa2.59□□□□□ -1.99
NUP100YKL068W DAL7P21826 554 aa2.59□□□□□ -2
NUP100YKL068W KRR1P25586 316 aaPredicted RBP2.59□□□□□ -2
NUP100YKL068W BIT2P38346 545 aa2.59□□□□□ -2
NUP100YKL068W CKB2P38930 258 aa2.59□□□□□ -2
NUP100YKL068W TIM10P87108 93 aa2.59□□□□□ -2
NUP100YKL068W TIF35Q04067 274 aaKnown RBP2.59□□□□□ -2
NUP100YKL068W CIA1Q05583 330 aa2.59□□□□□ -2
NUP100YKL068W GUD1Q07729 489 aa2.59□□□□□ -2
NUP100YKL068W LAP2Q10740 671 aa2.59□□□□□ -2
NUP100YKL068W HSP82P02829 709 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W BI4P03879 638 aa2.58□□□□□ -2
NUP100YKL068W HEM12P32347 362 aaPredicted RBP2.58□□□□□ -2
NUP100YKL068W DOM34P33309 386 aa2.58□□□□□ -2
NUP100YKL068W YKL107WP34251 309 aa2.58□□□□□ -2
NUP100YKL068W NOP4P37838 685 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W RVS167P39743 482 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W CCT8P47079 568 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W RBG2P53295 368 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W PAP2P53632 584 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W YKU80Q04437 629 aa2.58□□□□□ -2
NUP100YKL068W TDA9Q04545 1251 aa2.58□□□□□ -2
NUP100YKL068W YDR341CQ05506 607 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W YDR306CQ06640 478 aa2.58□□□□□ -2
NUP100YKL068W OPY2Q06810 360 aa2.58□□□□□ -2
NUP100YKL068W YOL114CQ12322 202 aa2.58□□□□□ -2
NUP100YKL068W SSM4P40318 1319 aa2.58□□□□□ -2
NUP100YKL068W YER152CP10356 443 aa2.58□□□□□ -2
NUP100YKL068W SEC23P15303 768 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W RER1P25560 188 aa2.58□□□□□ -2
NUP100YKL068W PGS1P25578 521 aa2.58□□□□□ -2
NUP100YKL068W PRP45P28004 379 aaPredicted RBP2.58□□□□□ -2
NUP100YKL068W MLF3P32047 452 aa2.58□□□□□ -2
NUP100YKL068W PSY4P38193 441 aa2.58□□□□□ -2
NUP100YKL068W YEL068CP39977 110 aa2.58□□□□□ -2
NUP100YKL068W UPF3P48412 387 aaKnown RBP2.58□□□□□ -2
NUP100YKL068W SIW14P53965 281 aa2.58□□□□□ -2
NUP100YKL068W YLR287CQ05881 355 aa2.58□□□□□ -2
NUP100YKL068W AOS1Q06624 347 aa2.58□□□□□ -2
NUP100YKL068W RSC58Q07979 502 aa2.58□□□□□ -2
NUP100YKL068W CDC45Q08032 650 aa2.58□□□□□ -2
NUP100YKL068W PGC1Q08959 321 aa2.58□□□□□ -2
NUP100YKL068W TY1A-DR3Q12441 440 aa2.58□□□□□ -2
NUP100YKL068W COX11P19516 300 aaKnown RBP2.57□□□□□ -2
NUP100YKL068W MSH3P25336 1018 aa2.57□□□□□ -2
NUP100YKL068W AFG2P32794 780 aa2.57□□□□□ -2
NUP100YKL068W ORC2P32833 620 aa2.57□□□□□ -2
NUP100YKL068W SER1P33330 395 aaKnown RBP2.57□□□□□ -2
NUP100YKL068W MKS1P34072 584 aa2.57□□□□□ -2
NUP100YKL068W MCM7P38132 845 aa2.57□□□□□ -2
NUP100YKL068W ALG2P43636 503 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms