RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C RPN10P38886 268 aaKnown RBP6.06□□□□□ -1.44
SCL1YGL011C YEN1P40028 759 aa6.06□□□□□ -1.44
SCL1YGL011C SDP1P40479 209 aa6.06□□□□□ -1.44
SCL1YGL011C ATG33Q06485 197 aa6.06□□□□□ -1.44
SCL1YGL011C RNQ1P25367 405 aa6.05□□□□□ -1.44
SCL1YGL011C STE14P32584 239 aa6.05□□□□□ -1.44
SCL1YGL011C PRP43P53131 767 aaKnown RBP6.05□□□□□ -1.44
SCL1YGL011C NHX1Q04121 633 aa6.05□□□□□ -1.44
SCL1YGL011C GUP2Q08929 609 aa6.05□□□□□ -1.44
SCL1YGL011C SOD2P00447 233 aa6.04□□□□□ -1.44
SCL1YGL011C SED4P25365 1065 aa6.04□□□□□ -1.44
SCL1YGL011C CHA4P43634 648 aa6.04□□□□□ -1.44
SCL1YGL011C UBC9P50623 157 aaPredicted RBP6.04□□□□□ -1.44
SCL1YGL011C NCS6P53088 359 aa6.04□□□□□ -1.44
SCL1YGL011C RIM8P53179 542 aa6.04□□□□□ -1.44
SCL1YGL011C UME1Q03010 460 aa6.04□□□□□ -1.44
SCL1YGL011C NOP12Q08208 459 aaKnown RBP6.04□□□□□ -1.44
SCL1YGL011C RPP2AP05319 106 aaKnown RBP6.03□□□□□ -1.44
SCL1YGL011C YHR078WP38799 552 aa6.03□□□□□ -1.44
SCL1YGL011C PMT3P47190 753 aa6.03□□□□□ -1.44
SCL1YGL011C YGR237CP50089 785 aa6.03□□□□□ -1.44
SCL1YGL011C ZIP2P53061 704 aa6.03□□□□□ -1.44
SCL1YGL011C GPG1P53130 126 aa6.03□□□□□ -1.44
SCL1YGL011C COG8Q04632 607 aa6.03□□□□□ -1.44
SCL1YGL011C YLR224WQ05947 369 aa6.03□□□□□ -1.44
SCL1YGL011C GUD1Q07729 489 aa6.03□□□□□ -1.44
SCL1YGL011C NPC2Q12408 173 aa6.03□□□□□ -1.44
SCL1YGL011C Q0142Q9ZZW4 58 aa6.03□□□□□ -1.44
SCL1YGL011C YKR051WP36142 418 aa6.02□□□□□ -1.45
SCL1YGL011C DOT6P40059 670 aaKnown RBP6.02□□□□□ -1.45
SCL1YGL011C NIT1P40447 199 aa6.02□□□□□ -1.45
SCL1YGL011C AVT1P47082 602 aa6.02□□□□□ -1.45
SCL1YGL011C NPY1P53164 384 aa6.02□□□□□ -1.45
SCL1YGL011C GIN4Q12263 1142 aa6.02□□□□□ -1.45
SCL1YGL011C KCS1Q12494 1050 aa6.02□□□□□ -1.45
SCL1YGL011C YLR149CQ99296 730 aa6.02□□□□□ -1.45
SCL1YGL011C PRP6P19735 899 aaPredicted RBP6.01□□□□□ -1.45
SCL1YGL011C TOD6P34219 525 aa6.01□□□□□ -1.45
SCL1YGL011C TYS1P36421 394 aaKnown RBP6.01□□□□□ -1.45
SCL1YGL011C HSL7P38274 827 aa6.01□□□□□ -1.45
SCL1YGL011C PLB1P39105 664 aa6.01□□□□□ -1.45
SCL1YGL011C SSY5P47002 699 aa6.01□□□□□ -1.45
SCL1YGL011C SEC21P32074 935 aaKnown RBP6□□□□□ -1.45
SCL1YGL011C YFL052WP43551 465 aa6□□□□□ -1.45
SCL1YGL011C YJR096WP47137 282 aa6□□□□□ -1.45
SCL1YGL011C MTQ2Q03920 221 aaPredicted RBP6□□□□□ -1.45
SCL1YGL011C IOC4Q04213 475 aa6□□□□□ -1.45
SCL1YGL011C ASM4Q05166 528 aa6□□□□□ -1.45
SCL1YGL011C TUB3P09734 445 aaKnown RBP5.99□□□□□ -1.45
SCL1YGL011C CCR4P31384 837 aaKnown RBP5.99□□□□□ -1.45
SCL1YGL011C ELM1P32801 640 aa5.99□□□□□ -1.45
SCL1YGL011C FLR1P38124 548 aa5.99□□□□□ -1.45
SCL1YGL011C SAK1P38990 1142 aa5.99□□□□□ -1.45
SCL1YGL011C BNA2P47125 453 aa5.99□□□□□ -1.45
SCL1YGL011C SLU7Q02775 382 aaKnown RBP5.99□□□□□ -1.45
SCL1YGL011C RPN7Q06103 429 aaKnown RBP5.99□□□□□ -1.45
SCL1YGL011C TMA10Q06177 86 aa5.99□□□□□ -1.45
SCL1YGL011C SSB1P11484 613 aaKnown RBP5.98□□□□□ -1.45
SCL1YGL011C PRP4P20053 465 aaKnown RBP5.98□□□□□ -1.45
SCL1YGL011C PRP19P32523 503 aaKnown RBP5.98□□□□□ -1.45
SCL1YGL011C LST4P34239 828 aa5.98□□□□□ -1.45
SCL1YGL011C MSS4P38994 779 aa5.98□□□□□ -1.45
SCL1YGL011C SSB2P40150 613 aaKnown RBP5.98□□□□□ -1.45
SCL1YGL011C NRD1P53617 575 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SCL1YGL011C FAP7Q12055 197 aaPredicted RBP5.98□□□□□ -1.45
SCL1YGL011C GPR1Q12361 961 aa5.98□□□□□ -1.45
SCL1YGL011C THI80P35202 319 aa5.97□□□□□ -1.45
SCL1YGL011C GPP1P41277 250 aaKnown RBP5.97□□□□□ -1.45
SCL1YGL011C PFA3P42836 336 aa5.97□□□□□ -1.45
SCL1YGL011C ASI2P53895 289 aa5.97□□□□□ -1.45
SCL1YGL011C MUS81Q04149 632 aaPredicted RBP5.97□□□□□ -1.45
SCL1YGL011C PRE10P21242 288 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SCL1YGL011C CKB2P38930 258 aa5.96□□□□□ -1.46
SCL1YGL011C PZF1P39933 429 aa5.96□□□□□ -1.46
SCL1YGL011C VHR1P40522 640 aa5.96□□□□□ -1.46
SCL1YGL011C MTR3P48240 250 aaPredicted RBP5.96□□□□□ -1.46
SCL1YGL011C SWM1Q12379 170 aa5.96□□□□□ -1.46
SCL1YGL011C KAR4P25583 335 aa5.95□□□□□ -1.46
SCL1YGL011C YKR018CP36114 725 aa5.95□□□□□ -1.46
SCL1YGL011C EXG2P52911 562 aa5.94□□□□□ -1.46
SCL1YGL011C PCL10P53124 433 aa5.94□□□□□ -1.46
SCL1YGL011C ARP4P80428 489 aa5.94□□□□□ -1.46
SCL1YGL011C HFD1Q04458 532 aa5.94□□□□□ -1.46
SCL1YGL011C PEX19Q07418 342 aa5.94□□□□□ -1.46
SCL1YGL011C CAD1P24813 409 aaKnown RBP5.93□□□□□ -1.46
SCL1YGL011C MNN4P36044 1178 aa5.93□□□□□ -1.46
SCL1YGL011C PKH1Q03407 766 aa5.93□□□□□ -1.46
SCL1YGL011C TMA17Q12513 150 aa5.93□□□□□ -1.46
SCL1YGL011C TDA3P38758 523 aa5.92□□□□□ -1.46
SCL1YGL011C RET2P43621 546 aa5.92□□□□□ -1.46
SCL1YGL011C YJR120WP47157 116 aa5.92□□□□□ -1.46
SCL1YGL011C YGR153WP48238 217 aa5.92□□□□□ -1.46
SCL1YGL011C DCS2Q12123 353 aa5.92□□□□□ -1.46
SCL1YGL011C LAS17Q12446 633 aa5.92□□□□□ -1.46
SCL1YGL011C YLR358CO13565 187 aa5.91□□□□□ -1.46
SCL1YGL011C YLR415CO13578 112 aa5.91□□□□□ -1.46
SCL1YGL011C STE11P23561 717 aa5.91□□□□□ -1.46
SCL1YGL011C MIP6P38760 659 aaKnown RBP5.91□□□□□ -1.46
SCL1YGL011C OAF1P39720 1047 aaPredicted RBP5.91□□□□□ -1.46
SCL1YGL011C MCM6P53091 1017 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms