RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	DAL7	P21826	554 aa		4.9	□□□□□ -1.63
LSM4	YER112W	YIL108W	P40483	696 aa	Known RBP	4.9	□□□□□ -1.63
LSM4	YER112W	TAD1	P53065	400 aa		4.9	□□□□□ -1.63
LSM4	YER112W	SFP1	P32432	683 aa		4.89	□□□□□ -1.63
LSM4	YER112W	SAP190	P36123	1033 aa		4.89	□□□□□ -1.63
LSM4	YER112W	KTR4	P38131	464 aa		4.89	□□□□□ -1.63
LSM4	YER112W	ZDS1	P50111	915 aa	Known RBP	4.89	□□□□□ -1.63
LSM4	YER112W	HDA1	P53973	706 aa		4.89	□□□□□ -1.63
LSM4	YER112W	RSC3	Q06639	885 aa		4.89	□□□□□ -1.63
LSM4	YER112W	YLR040C	Q07988	224 aa		4.89	□□□□□ -1.63
LSM4	YER112W	YOL073C	Q08232	322 aa		4.89	□□□□□ -1.63
LSM4	YER112W	SED4	P25365	1065 aa		4.88	□□□□□ -1.63
LSM4	YER112W	KAR4	P25583	335 aa		4.88	□□□□□ -1.63
LSM4	YER112W	CYS3	P31373	394 aa	Known RBP	4.88	□□□□□ -1.63
LSM4	YER112W	STO1	P34160	861 aa	Known RBP	4.88	□□□□□ -1.63
LSM4	YER112W	MTC2	P34246	357 aa		4.88	□□□□□ -1.63
LSM4	YER112W	SPC42	P36094	363 aa		4.88	□□□□□ -1.63
LSM4	YER112W	SET5	P38890	526 aa	Known RBP	4.88	□□□□□ -1.63
LSM4	YER112W	BUL1	P48524	976 aa		4.88	□□□□□ -1.63
LSM4	YER112W	NOP14	Q99207	810 aa	Known RBP	4.88	□□□□□ -1.63
LSM4	YER112W	PRC1	P00729	532 aa		4.87	□□□□□ -1.63
LSM4	YER112W	MEF1	P25039	761 aa		4.87	□□□□□ -1.63
LSM4	YER112W	VBA3	P25594	458 aa		4.87	□□□□□ -1.63
LSM4	YER112W	SUL1	P38359	859 aa		4.87	□□□□□ -1.63
LSM4	YER112W	SHR5	P41912	237 aa		4.87	□□□□□ -1.63
LSM4	YER112W	QRI1	P43123	477 aa	Known RBP	4.87	□□□□□ -1.63
LSM4	YER112W	STU2	P46675	888 aa		4.87	□□□□□ -1.63
LSM4	YER112W	SSL1	Q04673	461 aa	Predicted RBP	4.87	□□□□□ -1.63
LSM4	YER112W	MCH5	Q08777	521 aa		4.87	□□□□□ -1.63
LSM4	YER112W	YGR161W-C	Q3E744	92 aa		4.87	□□□□□ -1.63
LSM4	YER112W	DIF1	O13577	133 aa		4.86	□□□□□ -1.63
LSM4	YER112W	CDC9	P04819	755 aa		4.86	□□□□□ -1.63
LSM4	YER112W	RPD3	P32561	433 aa		4.86	□□□□□ -1.63
LSM4	YER112W	YEL1	P34225	687 aa		4.86	□□□□□ -1.63
LSM4	YER112W	CTF8	P38877	133 aa		4.86	□□□□□ -1.63
LSM4	YER112W	SDP1	P40479	209 aa		4.86	□□□□□ -1.63
LSM4	YER112W	RLP7	P40693	322 aa	Known RBP	4.86	□□□□□ -1.63
LSM4	YER112W	ALY2	P47029	1046 aa		4.86	□□□□□ -1.63
LSM4	YER112W	OMS1	Q06668	471 aa		4.86	□□□□□ -1.63
LSM4	YER112W	UPC2	Q12151	913 aa		4.86	□□□□□ -1.63
LSM4	YER112W	SRD1	P09007	221 aa		4.85	□□□□□ -1.63
LSM4	YER112W	FBP1	P09201	348 aa		4.85	□□□□□ -1.63
LSM4	YER112W	PER1	P25625	357 aa		4.85	□□□□□ -1.63
LSM4	YER112W	RPN10	P38886	268 aa	Known RBP	4.85	□□□□□ -1.63
LSM4	YER112W	ATF1	P40353	525 aa		4.85	□□□□□ -1.63
LSM4	YER112W	CAF16	P43569	289 aa		4.85	□□□□□ -1.63
LSM4	YER112W	DUS1	P53759	423 aa	Known RBP	4.85	□□□□□ -1.63
LSM4	YER112W	SNP1	Q00916	300 aa	Predicted RBP	4.85	□□□□□ -1.63
LSM4	YER112W	TFB2	Q02939	513 aa		4.85	□□□□□ -1.63
LSM4	YER112W	LRS4	Q04087	347 aa	Known RBP	4.85	□□□□□ -1.63
LSM4	YER112W	TMN2	Q04562	672 aa		4.85	□□□□□ -1.63
LSM4	YER112W	COG8	Q04632	607 aa		4.85	□□□□□ -1.63
LSM4	YER112W	WHI4	Q07655	649 aa	Known RBP	4.85	□□□□□ -1.63
LSM4	YER112W	HAL9	Q12180	1030 aa		4.85	□□□□□ -1.63
LSM4	YER112W	YOR022C	Q12204	715 aa		4.85	□□□□□ -1.63
LSM4	YER112W	TRP4	P07285	380 aa	Predicted RBP	4.84	□□□□□ -1.63
LSM4	YER112W	MCD4	P36051	919 aa		4.84	□□□□□ -1.63
LSM4	YER112W	YHR078W	P38799	552 aa		4.84	□□□□□ -1.63
LSM4	YER112W	TY4A-J	P47023	414 aa		4.84	□□□□□ -1.63
LSM4	YER112W	TIM44	Q01852	431 aa		4.84	□□□□□ -1.63
LSM4	YER112W	YBR182C-A	Q8TGU6	64 aa		4.84	□□□□□ -1.63
LSM4	YER112W	CAD1	P24813	409 aa	Known RBP	4.83	□□□□□ -1.64
LSM4	YER112W	ERG4	P25340	473 aa		4.83	□□□□□ -1.64
LSM4	YER112W	YCL002C	P25565	263 aa		4.83	□□□□□ -1.64
LSM4	YER112W	YGL081W	P53156	320 aa		4.83	□□□□□ -1.64
LSM4	YER112W	THI21	Q08975	551 aa		4.83	□□□□□ -1.64
LSM4	YER112W	ACF2	Q12168	779 aa		4.83	□□□□□ -1.64
LSM4	YER112W	RAD18	P10862	487 aa		4.82	□□□□□ -1.64
LSM4	YER112W	HOG1	P32485	435 aa		4.82	□□□□□ -1.64
LSM4	YER112W	YJR142W	P47173	342 aa		4.82	□□□□□ -1.64
LSM4	YER112W	HXT16	P47185	567 aa		4.82	□□□□□ -1.64
LSM4	YER112W	STB4	P50104	949 aa		4.82	□□□□□ -1.64
LSM4	YER112W	YNL193W	P53870	558 aa		4.82	□□□□□ -1.64
LSM4	YER112W	RNT1	Q02555	471 aa		4.82	□□□□□ -1.64
LSM4	YER112W	SWM1	Q12379	170 aa		4.82	□□□□□ -1.64
LSM4	YER112W	ADR1	P07248	1323 aa		4.81	□□□□□ -1.64
LSM4	YER112W	RPL8A	P17076	256 aa	Known RBP	4.81	□□□□□ -1.64
LSM4	YER112W	NGG1	P32494	702 aa		4.81	□□□□□ -1.64
LSM4	YER112W	STE14	P32584	239 aa		4.81	□□□□□ -1.64
LSM4	YER112W	PZF1	P39933	429 aa		4.81	□□□□□ -1.64
LSM4	YER112W	DOT6	P40059	670 aa	Known RBP	4.81	□□□□□ -1.64
LSM4	YER112W	NHX1	Q04121	633 aa		4.81	□□□□□ -1.64
LSM4	YER112W	CRR1	Q05790	422 aa		4.81	□□□□□ -1.64
LSM4	YER112W	IRC10	Q08118	586 aa		4.81	□□□□□ -1.64
LSM4	YER112W	PCL2	P25693	308 aa		4.8	□□□□□ -1.64
LSM4	YER112W	HSL7	P38274	827 aa		4.8	□□□□□ -1.64
LSM4	YER112W	YFL052W	P43551	465 aa		4.8	□□□□□ -1.64
LSM4	YER112W	SSY5	P47002	699 aa		4.8	□□□□□ -1.64
LSM4	YER112W	HLJ1	P48353	224 aa		4.8	□□□□□ -1.64
LSM4	YER112W	ZIP2	P53061	704 aa		4.8	□□□□□ -1.64
LSM4	YER112W	SDA1	P53313	767 aa	Known RBP	4.8	□□□□□ -1.64
LSM4	YER112W	SFL1	P20134	766 aa		4.79	□□□□□ -1.64
LSM4	YER112W	SEC21	P32074	935 aa	Known RBP	4.79	□□□□□ -1.64
LSM4	YER112W	CUE2	P36075	443 aa	Known RBP	4.79	□□□□□ -1.64
LSM4	YER112W	NPY1	P53164	384 aa		4.79	□□□□□ -1.64
LSM4	YER112W	ASI2	P53895	289 aa		4.79	□□□□□ -1.64
LSM4	YER112W	DNM1	P54861	757 aa		4.79	□□□□□ -1.64
LSM4	YER112W	PKH1	Q03407	766 aa		4.79	□□□□□ -1.64
LSM4	YER112W	YDR338C	Q05497	695 aa		4.79	□□□□□ -1.64
LSM4	YER112W	YLR001C	Q07895	862 aa		4.79	□□□□□ -1.64

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