RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	ADA2	Q02336	434 aa		13.86	□□□□□ -0.19
NPL3	YDR432W	CTF3	Q12748	733 aa		13.86	□□□□□ -0.19
NPL3	YDR432W	YHR054C	P38780	354 aa		13.85	□□□□□ -0.19
NPL3	YDR432W	FYV8	P46949	817 aa	Known RBP	13.85	□□□□□ -0.19
NPL3	YDR432W	GAL80	P04387	435 aa		13.84	□□□□□ -0.19
NPL3	YDR432W	VMA1	P17255	1071 aa	Known RBP	13.84	□□□□□ -0.19
NPL3	YDR432W	VPS3	P23643	1011 aa		13.84	□□□□□ -0.19
NPL3	YDR432W	YKL097C	P34245	136 aa		13.84	□□□□□ -0.19
NPL3	YDR432W	BDH2	P39713	417 aa		13.84	□□□□□ -0.19
NPL3	YDR432W	NPP2	P39997	493 aa		13.84	□□□□□ -0.19
NPL3	YDR432W	BIO5	P53744	561 aa	Known RBP	13.84	□□□□□ -0.19
NPL3	YDR432W	UTP14	Q04500	899 aa	Known RBP	13.84	□□□□□ -0.19
NPL3	YDR432W	SGT2	Q12118	346 aa	Known RBP	13.84	□□□□□ -0.19
NPL3	YDR432W	HIR1	P32479	840 aa		13.83	□□□□□ -0.2
NPL3	YDR432W	YEL1	P34225	687 aa		13.83	□□□□□ -0.2
NPL3	YDR432W	YBR284W	P38150	797 aa		13.83	□□□□□ -0.2
NPL3	YDR432W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	13.83	□□□□□ -0.2	not detected
NPL3	YDR432W	LEE1	Q02799	301 aa	Known RBP	13.83	□□□□□ -0.2
NPL3	YDR432W	PEX19	Q07418	342 aa		13.83	□□□□□ -0.2
NPL3	YDR432W	APM4	Q99186	491 aa		13.83	□□□□□ -0.2
NPL3	YDR432W	RGD1	P38339	666 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	UBP5	P39944	805 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	TAF1	P46677	1066 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	POL31	P46957	487 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	CCM1	P48237	864 aa	Predicted RBP	13.82	□□□□□ -0.2
NPL3	YDR432W	NBP1	P52919	319 aa	Predicted RBP	13.82	□□□□□ -0.2
NPL3	YDR432W	HST1	P53685	503 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	NSE5	Q03718	556 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	PML39	Q03760	334 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	PSR2	Q07949	397 aa		13.82	□□□□□ -0.2
NPL3	YDR432W	SPE3	Q12074	293 aa	Known RBP	13.82	□□□□□ -0.2
NPL3	YDR432W	ASP3-2	P0CX77	362 aa		13.81	□□□□□ -0.2
NPL3	YDR432W	ASP3-3	P0CX78	362 aa		13.81	□□□□□ -0.2
NPL3	YDR432W	ASP3-4	P0CX79	362 aa		13.81	□□□□□ -0.2
NPL3	YDR432W	ASP3-1	P0CZ17	362 aa		13.81	□□□□□ -0.2
NPL3	YDR432W	COY1	P34237	679 aa		13.81	□□□□□ -0.2
NPL3	YDR432W	TIF35	Q04067	274 aa	Known RBP	13.81	□□□□□ -0.2
NPL3	YDR432W	DAL7	P21826	554 aa		13.8	□□□□□ -0.2
NPL3	YDR432W	RAM1	P22007	431 aa		13.8	□□□□□ -0.2
NPL3	YDR432W	RFT1	P38206	574 aa	Predicted RBP	13.8	□□□□□ -0.2
NPL3	YDR432W	HXT5	P38695	592 aa		13.8	□□□□□ -0.2
NPL3	YDR432W	ARP1	P38696	384 aa		13.8	□□□□□ -0.2
NPL3	YDR432W	YTA12	P40341	825 aa		13.8	□□□□□ -0.2
NPL3	YDR432W	HSH155	P49955	971 aa	Known RBP	13.8	□□□□□ -0.2
NPL3	YDR432W	SNU56	Q03782	492 aa	Known RBP	13.8	□□□□□ -0.2
NPL3	YDR432W	PDE1	P22434	369 aa		13.79	□□□□□ -0.2
NPL3	YDR432W	MUD1	P32605	298 aa	Known RBP	13.79	□□□□□ -0.2
NPL3	YDR432W	TCO89	Q08921	799 aa		13.79	□□□□□ -0.2
NPL3	YDR432W	RPS9A	O13516	197 aa	Known RBP	13.78	□□□□□ -0.2
NPL3	YDR432W	NAT1	P12945	854 aa	Known RBP	13.78	□□□□□ -0.2
NPL3	YDR432W	PEP7	P32609	515 aa		13.78	□□□□□ -0.2
NPL3	YDR432W	SLG1	P54867	378 aa		13.78	□□□□□ -0.2
NPL3	YDR432W	DON1	Q05610	365 aa		13.78	□□□□□ -0.2
NPL3	YDR432W	LEA1	Q08963	238 aa	Predicted RBP	13.78	□□□□□ -0.2
NPL3	YDR432W	LAA1	P39526	2014 aa		13.78	□□□□□ -0.2
NPL3	YDR432W	SPO11	P23179	398 aa		13.77	□□□□□ -0.21
NPL3	YDR432W	PEX34	P25584	144 aa		13.77	□□□□□ -0.21
NPL3	YDR432W	CDC15	P27636	974 aa		13.77	□□□□□ -0.21
NPL3	YDR432W	SLA2	P33338	968 aa		13.77	□□□□□ -0.21
NPL3	YDR432W	BIM1	P40013	344 aa		13.77	□□□□□ -0.21
NPL3	YDR432W	MED1	Q12321	566 aa		13.77	□□□□□ -0.21
NPL3	YDR432W	FMP27	Q06179	2628 aa		13.76	□□□□□ -0.21
NPL3	YDR432W	HIS5	P07172	385 aa		13.76	□□□□□ -0.21
NPL3	YDR432W	FTR1	P40088	404 aa		13.76	□□□□□ -0.21
NPL3	YDR432W	HYR1	P40581	163 aa	Known RBP	13.76	□□□□□ -0.21
NPL3	YDR432W	CDD1	Q06549	142 aa		13.76	□□□□□ -0.21
NPL3	YDR432W	TPK1	P06244	397 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	MSP1	P28737	362 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	LCB2	P40970	561 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	CIR1	P42940	261 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	DAS1	P47005	663 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	VPS25	P47142	202 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	FMP25	Q08023	583 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	TAF10	Q12030	206 aa		13.75	□□□□□ -0.21
NPL3	YDR432W	RPL22A	P05749	121 aa	Known RBP	13.74	□□□□□ -0.21
NPL3	YDR432W	TRK2	P28584	889 aa		13.74	□□□□□ -0.21
NPL3	YDR432W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.74	□□□□□ -0.21	not detected
NPL3	YDR432W	KDX1	P36005	433 aa		13.74	□□□□□ -0.21
NPL3	YDR432W	PTC4	P38089	393 aa		13.74	□□□□□ -0.21
NPL3	YDR432W	TBS1	P38114	1094 aa		13.74	□□□□□ -0.21
NPL3	YDR432W	SGF29	P25554	259 aa		13.73	□□□□□ -0.21
NPL3	YDR432W	SHE3	P38272	425 aa	Known RBP	13.73	□□□□□ -0.21
NPL3	YDR432W	TGL3	P40308	642 aa		13.73	□□□□□ -0.21
NPL3	YDR432W	PSP1	P50896	841 aa	Known RBP	13.73	□□□□□ -0.21
NPL3	YDR432W	HAP5	Q02516	242 aa		13.73	□□□□□ -0.21
NPL3	YDR432W	NSE1	Q07913	336 aa		13.73	□□□□□ -0.21
NPL3	YDR432W	RLP24	Q07915	199 aa	Known RBP	13.73	□□□□□ -0.21
NPL3	YDR432W	APC11	Q12157	165 aa		13.73	□□□□□ -0.21
NPL3	YDR432W	KEX1	P09620	729 aa		13.72	□□□□□ -0.21
NPL3	YDR432W	CCT5	P40413	562 aa	Known RBP	13.72	□□□□□ -0.21
NPL3	YDR432W	EAF7	P53911	425 aa	Known RBP	13.72	□□□□□ -0.21
NPL3	YDR432W	ELM1	P32801	640 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	SMC3	P47037	1230 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	FAP1	P53971	965 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	TIM8	P57744	87 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	MLH2	Q07980	695 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	TLG2	Q08144	397 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	HRT3	Q12347	344 aa		13.71	□□□□□ -0.21
NPL3	YDR432W	CHS2	P14180	963 aa		13.7	□□□□□ -0.22
NPL3	YDR432W	MET4	P32389	672 aa		13.7	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms