RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FAM184AQ8NB25 1140 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 NUP62CLQ9H1M0 184 aa16.67■□□□□ 0.26
CACNA1A-228ENST00000636610 TUBGCP6Q96RT7 1819 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 PSMA5P28066 241 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 TIMM10P62072 90 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 BRF1Q92994 677 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 IL17RAQ96F46 866 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 RNF20Q5VTR2 975 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 Q6ZUG5 572 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 TNMDQ9H2S6 317 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
CACNA1A-228ENST00000636610 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 H3BQV1 296 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 PTGS1P23219 599 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 ANO6Q4KMQ2 910 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 LRRC37A3O60309 1634 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 NR1I2O75469 434 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 TAF5LO75529 589 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 MCM5P33992 734 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 LRMPQ12912 555 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-228ENST00000636610 ZNF594Q96JF6 807 aaPredicted RBP16.64■□□□□ 0.26
CACNA1A-228ENST00000636610 KCNF1Q9H3M0 494 aa16.64■□□□□ 0.26
CACNA1A-228ENST00000636610 ANKARQ7Z5J8 1434 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 GOLIM4O00461 696 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 MAP3K11Q16584 847 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 COL15A1P39059 1388 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 TYRO3Q06418 890 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
CACNA1A-228ENST00000636610 LTN1O94822 1766 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 ARHGAP23Q9P227 1491 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 PIBF1Q8WXW3 757 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 SNRKQ9NRH2 765 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 CYP21A2P08686 494 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
CACNA1A-228ENST00000636610 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 PTPN12Q05209 780 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 TRIM5Q9C035 493 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
CACNA1A-228ENST00000636610 CACNA1FO60840 1977 aa16.61■□□□□ 0.25
CACNA1A-228ENST00000636610 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
CACNA1A-228ENST00000636610 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
CACNA1A-228ENST00000636610 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-228ENST00000636610 SLIT1O75093 1534 aa16.61■□□□□ 0.25
CACNA1A-228ENST00000636610 GPHNQ9NQX3 736 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-228ENST00000636610 HIP1O00291 1037 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 HAND2P61296 217 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 OTUD7BQ6GQQ9 843 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 CBX8Q9HC52 389 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 ERBB3P21860 1342 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 NPHP3Q7Z494 1330 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 NPHP4O75161 1426 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-228ENST00000636610 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 PDCP20941 246 aa16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 C16orf45Q96MC5 204 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 PHKG2P15735 406 aa16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 SCRN1Q12765 414 aa16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
CACNA1A-228ENST00000636610 DYNC1I1O14576 645 aa16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 CYP27B1O15528 508 aa16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 KCNB2Q92953 911 aa16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 NFAT5O94916 1531 aa16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 A1BGP04217 495 aa16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 CABP4P57796 275 aa16.58■□□□□ 0.24
CACNA1A-228ENST00000636610 ZNF165P49910 485 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 ARID5BQ14865 1188 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 ZNF592Q92610 1267 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 ZNF609O15014 1411 aa16.57■□□□□ 0.24
CACNA1A-228ENST00000636610 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
CACNA1A-228ENST00000636610 PUS3Q9BZE2 481 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms