RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SLC4A9Q96Q91 983 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 SHANK3Q9BYB0 1731 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 STARD3NLO95772 234 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 PDRG1Q9NUG6 133 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 ZBTB1Q9Y2K1 713 aa14.91□□□□□ -0.02
CIITA-212ENST00000618207 LAMB4A4D0S4 1761 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 TCIRG1Q13488 830 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 NECAB1Q8N987 351 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
CIITA-212ENST00000618207 FGD1P98174 961 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 NECTIN1Q15223 517 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 TTC14Q96N46 770 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 LMBRD1Q9NUN5 540 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 TOGARAM1Q9Y4F4 1720 aa14.9□□□□□ -0.02
CIITA-212ENST00000618207 ATP5JP18859 108 aa14.89□□□□□ -0.03
CIITA-212ENST00000618207 SKOR2Q2VWA4 1001 aaPredicted RBP14.89□□□□□ -0.03
CIITA-212ENST00000618207 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
CIITA-212ENST00000618207 LIMCH1Q9UPQ0 1083 aa14.89□□□□□ -0.03
CIITA-212ENST00000618207 HIP1O00291 1037 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 SLC27A2O14975 620 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 MAP4K1Q92918 833 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 A0A1B0GUL7 405 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 EYA2O00167 538 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
CIITA-212ENST00000618207 NSFL1CQ9UNZ2 370 aaKnown RBP14.88□□□□□ -0.03
CIITA-212ENST00000618207 TCHHQ07283 1943 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 FSD2A1L4K1 749 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 STK3Q13188 491 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 GORABQ5T7V8 394 aa14.88□□□□□ -0.03
CIITA-212ENST00000618207 ISCA1Q9BUE6 129 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 GRPEL1Q9HAV7 217 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 BRD1O95696 1058 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 INTS4Q96HW7 963 aaKnown RBP14.87□□□□□ -0.03
CIITA-212ENST00000618207 CEP126Q9P2H0 1117 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 SMC3Q9UQE7 1217 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
CIITA-212ENST00000618207 ADORA1P30542 326 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 IL15P40933 162 aaPredicted RBP14.86□□□□□ -0.03
CIITA-212ENST00000618207 KLHL40Q2TBA0 621 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 CLEC17AQ6ZS10 378 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 TNS2Q63HR2 1409 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 ROBO1Q9Y6N7 1651 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 EPB41L2O43491 1005 aaKnown RBP14.86□□□□□ -0.03
CIITA-212ENST00000618207 IFIT1P09914 478 aaKnown RBP14.86□□□□□ -0.03
CIITA-212ENST00000618207 HSP90AB3PQ58FF7 597 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 GPT2Q8TD30 523 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 LRRC2Q9BYS8 371 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 COL15A1P39059 1388 aa14.86□□□□□ -0.03
CIITA-212ENST00000618207 TAF5LO75529 589 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 ME3Q16798 604 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 HAUS7Q99871 368 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 PAG1Q9NWQ8 432 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 ITGB4P16144 1822 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 CYP19A1P11511 503 aaPredicted RBP14.85□□□□□ -0.03
CIITA-212ENST00000618207 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 BLOC1S2Q6QNY1 142 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 PI16Q6UXB8 463 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 TEX13AQ9BXU3 409 aaPredicted RBP14.85□□□□□ -0.03
CIITA-212ENST00000618207 ZSWIM6Q9HCJ5 1215 aa14.85□□□□□ -0.03
CIITA-212ENST00000618207 TRMT112Q9UI30 125 aaKnown RBP14.85□□□□□ -0.03
CIITA-212ENST00000618207 ZNF609O15014 1411 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 MAP3K15Q6ZN16 1313 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 IFIT5Q13325 482 aaKnown RBP14.84□□□□□ -0.03
CIITA-212ENST00000618207 DDB1Q16531 1140 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 GIGYF2Q6Y7W6 1299 aaKnown RBP14.84□□□□□ -0.03
CIITA-212ENST00000618207 TPCN1Q9ULQ1 816 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 PTMSP20962 102 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 GJB2P29033 226 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 KCNQ4P56696 695 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
CIITA-212ENST00000618207 GREM2Q9H772 168 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 NUP188Q5SRE5 1749 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 A0A0G2JLW4 131 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 VPS37CA5D8V6 355 aaPredicted RBP14.84□□□□□ -0.03
CIITA-212ENST00000618207 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
CIITA-212ENST00000618207 MED23Q9ULK4 1368 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 SYT1P21579 422 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 MRE11P49959 708 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 LDHAL6AQ6ZMR3 332 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 MCMDC2Q4G0Z9 681 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 NLRP10Q86W26 655 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 VSIG10Q8N0Z9 540 aa14.83□□□□□ -0.04
CIITA-212ENST00000618207 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
CIITA-212ENST00000618207 HELBQ8NG08 1087 aaPredicted RBP14.83□□□□□ -0.04
CIITA-212ENST00000618207 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.83□□□□□ -0.04
CIITA-212ENST00000618207 TJP1Q07157 1748 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 BCL9O00512 1426 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 PCCAP05165 728 aaPredicted RBP14.82□□□□□ -0.04
CIITA-212ENST00000618207 ITGA6P23229 1130 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 ATP6V1AP38606 617 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 XAGE2Q96GT9 111 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms