RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ABCF3Q9NUQ8 709 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MAP4K4O95819 1239 aaPredicted RBP12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 HSPA1LP34931 641 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 STK38Q15208 465 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 METTL14Q9HCE5 456 aaKnown RBP12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 PHACTR2O75167 634 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 RUFY3Q7L099 469 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DAB2P98082 770 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SPA17Q15506 151 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TDRD12Q587J7 1177 aaKnown RBP12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 GRPEL1Q9HAV7 217 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DAPK1P53355 1430 aa12.33□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ABL1P00519 1130 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FAM169AQ9Y6X4 670 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CACNA1FO60840 1977 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 GIPC1O14908 333 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 GEMIN8Q9NWZ8 242 aaKnown RBP12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ZFYP08048 801 aaPredicted RBP12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CPLX4Q7Z7G2 160 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC77Q9BR77 488 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 PTPRKQ15262 1439 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MRRFQ96E11 262 aaKnown RBP12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 NUP62CLQ9H1M0 184 aa12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
CNTNAP3B-211ENST00000612828 USO1O60763 962 aaKnown RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 IGHDP01880 384 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ZBTB17Q13105 803 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 NCOA1Q15788 1441 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SPATS2LQ9NUQ6 558 aaKnown RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FMNL3Q8IVF7 1028 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 LRP2BPQ9P2M1 347 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ERBINQ96RT1 1412 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DNAJC3Q13217 504 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 JADE2Q9NQC1 790 aa12.31□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC50Q8IVM0 306 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 STK10O94804 968 aaKnown RBP12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DUSP27Q5VZP5 1158 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FKBP4Q02790 459 aaKnown RBP eCLIP12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 EEF2P13639 858 aaKnown RBP12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 HSD3B2P26439 372 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ARHGAP25P42331 645 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 PPARDQ03181 441 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SPECC1LQ69YQ0 1117 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 NOD1Q9Y239 953 aa12.3□□□□□ -0.44
CNTNAP3B-211ENST00000612828 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FSD1Q9BTV5 496 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MAK16Q9BXY0 300 aaKnown RBP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TDO2P48775 406 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TBC1D2Q9BYX2 928 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SLC7A5P2Q9GIP4 190 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ATF3P18847 181 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TMEM57Q8N5G2 664 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FAM95CA0A1B0GW59 222 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TXNDC9O14530 226 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CUL5Q93034 780 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 POLR3DP05423 398 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 PIP4K2AP48426 406 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ESPNB1AK53 854 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 RAB3IPQ96QF0 476 aaPredicted RBP12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 PLCB4Q15147 1175 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DAAM1Q9Y4D1 1078 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CCDC110Q8TBZ0 833 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FAM200AQ8TCP9 573 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms