RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 PTPRGP23470 1445 aa8.28□□□□□ -1.08
CRLF3-206ENST00000585268 SSFA2P28290 1259 aa8.27□□□□□ -1.09
CRLF3-206ENST00000585268 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
CRLF3-206ENST00000585268 IDH3AP50213 366 aa8.27□□□□□ -1.09
CRLF3-206ENST00000585268 NAA30Q147X3 362 aaPredicted RBP8.27□□□□□ -1.09
CRLF3-206ENST00000585268 KCNH4Q9UQ05 1017 aa8.27□□□□□ -1.09
CRLF3-206ENST00000585268 NEURL1BA8MQ27 555 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 SHISA8B8ZZ34 492 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 TNFRSF10BO14763 440 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 ADH6P28332 368 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 INPP5BP32019 993 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 SCNN1AP37088 669 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 SPEM2Q0P670 501 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 FCHSD1Q86WN1 690 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 IFT43Q96FT9 208 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 PRR12Q9ULL5 1215 aa8.26□□□□□ -1.09
CRLF3-206ENST00000585268 KIF21BO75037 1637 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 MICAL2O94851 1124 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 PCBP4P57723 403 aaKnown RBP8.25□□□□□ -1.09
CRLF3-206ENST00000585268 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 FAM26DQ5JW98 314 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 PHLDB3Q6NSJ2 640 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
CRLF3-206ENST00000585268 GALNT6Q8NCL4 622 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 ENAMQ9NRM1 1142 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 SEPT3Q9UH03 358 aa8.25□□□□□ -1.09
CRLF3-206ENST00000585268 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
CRLF3-206ENST00000585268 EPXP11678 715 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 ARSDP51689 593 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 SYT9Q86SS6 491 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 TREML1Q86YW5 311 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 ETFBKMTQ8IXQ9 262 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 EDARADDQ8WWZ3 215 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 CTTNBP2Q8WZ74 1663 aa8.24□□□□□ -1.09
CRLF3-206ENST00000585268 KIAA0556O60303 1618 aa8.23□□□□□ -1.09
CRLF3-206ENST00000585268 EPB42P16452 691 aa8.23□□□□□ -1.09
CRLF3-206ENST00000585268 GSK3AP49840 483 aa8.23□□□□□ -1.09
CRLF3-206ENST00000585268 MDFIQ99750 246 aa8.23□□□□□ -1.09
CRLF3-206ENST00000585268 GOLGA3Q08378 1498 aa8.23□□□□□ -1.09
CRLF3-206ENST00000585268 OPLAHO14841 1288 aa8.22□□□□□ -1.09
CRLF3-206ENST00000585268 SIN3BO75182 1162 aa8.22□□□□□ -1.09
CRLF3-206ENST00000585268 BRD2P25440 801 aaKnown RBP8.22□□□□□ -1.09
CRLF3-206ENST00000585268 NEDD1Q8NHV4 660 aa8.22□□□□□ -1.09
CRLF3-206ENST00000585268 UACAQ9BZF9 1416 aa8.21□□□□□ -1.09
CRLF3-206ENST00000585268 TNFRSF25Q93038 417 aa8.21□□□□□ -1.1
CRLF3-206ENST00000585268 GSX2Q9BZM3 304 aa8.21□□□□□ -1.1
CRLF3-206ENST00000585268 USP20Q9Y2K6 914 aa8.21□□□□□ -1.1
CRLF3-206ENST00000585268 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
CRLF3-206ENST00000585268 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
CRLF3-206ENST00000585268 NEUROD1Q13562 356 aa8.2□□□□□ -1.1
CRLF3-206ENST00000585268 BHMTQ93088 406 aa8.2□□□□□ -1.1
CRLF3-206ENST00000585268 STIM2Q9P246 746 aa8.2□□□□□ -1.1
CRLF3-206ENST00000585268 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
CRLF3-206ENST00000585268 ADCY10Q96PN6 1610 aa8.2□□□□□ -1.1
CRLF3-206ENST00000585268 PLB1Q6P1J6 1458 aa8.19□□□□□ -1.1
CRLF3-206ENST00000585268 MARSP56192 900 aaKnown RBP8.19□□□□□ -1.1
CRLF3-206ENST00000585268 CCINQ13939 588 aa8.19□□□□□ -1.1
CRLF3-206ENST00000585268 HELQQ8TDG4 1101 aa8.19□□□□□ -1.1
CRLF3-206ENST00000585268 FHOD3Q2V2M9 1422 aa8.19□□□□□ -1.1
CRLF3-206ENST00000585268 ELOA3CA0A087WX78 387 aaPredicted RBP8.18□□□□□ -1.1
CRLF3-206ENST00000585268 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 ELOA3DA6NLF2 546 aaPredicted RBP8.18□□□□□ -1.1
CRLF3-206ENST00000585268 ADARB2-AS1A8MUL3 147 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 ZBTB39O15060 712 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
CRLF3-206ENST00000585268 ELOA3BQ3SY89 546 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 ELOA3Q8NG57 546 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 C11orf16Q9NQ32 467 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 UHRF1BP1LA0JNW5 1464 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 SAMD9Q5K651 1589 aa8.18□□□□□ -1.1
CRLF3-206ENST00000585268 NFKB1P19838 968 aa8.17□□□□□ -1.1
CRLF3-206ENST00000585268 AMPD1P23109 780 aa8.17□□□□□ -1.1
CRLF3-206ENST00000585268 ABTB2Q8N961 1025 aa8.17□□□□□ -1.1
CRLF3-206ENST00000585268 GTF3C2Q8WUA4 911 aaPredicted RBP8.17□□□□□ -1.1
CRLF3-206ENST00000585268 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.17□□□□□ -1.1
CRLF3-206ENST00000585268 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
CRLF3-206ENST00000585268 ABCC2Q92887 1545 aa8.17□□□□□ -1.1
CRLF3-206ENST00000585268 ABCA8O94911 1581 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 EGFRP00533 1210 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 ZAP70P43403 619 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 DGKGP49619 791 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 RASSF7Q02833 373 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 B4GALNT3Q6L9W6 998 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 CMTR1Q8N1G2 835 aaKnown RBP8.16□□□□□ -1.1
CRLF3-206ENST00000585268 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
CRLF3-206ENST00000585268 PNMA5Q96PV4 448 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 ZFATQ9P243 1243 aa8.16□□□□□ -1.1
CRLF3-206ENST00000585268 ARHGAP35Q9NRY4 1499 aa8.15□□□□□ -1.1
CRLF3-206ENST00000585268 ADH7P40394 386 aa8.15□□□□□ -1.1
CRLF3-206ENST00000585268 MTMR3Q13615 1198 aa8.15□□□□□ -1.1
CRLF3-206ENST00000585268 TRIP4Q15650 581 aaPredicted RBP8.15□□□□□ -1.1
CRLF3-206ENST00000585268 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
CRLF3-206ENST00000585268 RRAGCQ9HB90 399 aa8.15□□□□□ -1.1
CRLF3-206ENST00000585268 KDM5BQ9UGL1 1544 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms