RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
CRLF3-206ENST00000585268 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
CRLF3-206ENST00000585268 PHF23Q9BUL5 403 aaPredicted RBP21.06■□□□□ 0.96
CRLF3-206ENST00000585268 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
CRLF3-206ENST00000585268 FOXD1Q16676 465 aa19.58■□□□□ 0.72
CRLF3-206ENST00000585268 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
CRLF3-206ENST00000585268 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
CRLF3-206ENST00000585268 ADRA2BP18089 450 aa18.57■□□□□ 0.56
CRLF3-206ENST00000585268 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
CRLF3-206ENST00000585268 MSH5O43196 834 aa18.21■□□□□ 0.51
CRLF3-206ENST00000585268 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
CRLF3-206ENST00000585268 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
CRLF3-206ENST00000585268 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
CRLF3-206ENST00000585268 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
CRLF3-206ENST00000585268 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CRLF3-206ENST00000585268 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
CRLF3-206ENST00000585268 KCNA4P22459 653 aa16.58■□□□□ 0.24
CRLF3-206ENST00000585268 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
CRLF3-206ENST00000585268 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
CRLF3-206ENST00000585268 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
CRLF3-206ENST00000585268 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
CRLF3-206ENST00000585268 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
CRLF3-206ENST00000585268 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
CRLF3-206ENST00000585268 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
CRLF3-206ENST00000585268 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
CRLF3-206ENST00000585268 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
CRLF3-206ENST00000585268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
CRLF3-206ENST00000585268 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
CRLF3-206ENST00000585268 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
CRLF3-206ENST00000585268 ZBTB22O15209 634 aa15.28■□□□□ 0.04
CRLF3-206ENST00000585268 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
CRLF3-206ENST00000585268 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
CRLF3-206ENST00000585268 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
CRLF3-206ENST00000585268 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
CRLF3-206ENST00000585268 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
CRLF3-206ENST00000585268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
CRLF3-206ENST00000585268 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
CRLF3-206ENST00000585268 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
CRLF3-206ENST00000585268 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
CRLF3-206ENST00000585268 APLP2Q06481 763 aa14.85□□□□□ -0.03
CRLF3-206ENST00000585268 CAPN15O75808 1086 aa14.8□□□□□ -0.04
CRLF3-206ENST00000585268 ATXN8OSP0DMR3 200 aa14.74□□□□□ -0.05
CRLF3-206ENST00000585268 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
CRLF3-206ENST00000585268 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
CRLF3-206ENST00000585268 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
CRLF3-206ENST00000585268 DSG3P32926 999 aa14.68□□□□□ -0.06
CRLF3-206ENST00000585268 ABCB7O75027 752 aa14.51□□□□□ -0.09
CRLF3-206ENST00000585268 POLA2Q14181 598 aa14.43□□□□□ -0.1
CRLF3-206ENST00000585268 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
CRLF3-206ENST00000585268 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
CRLF3-206ENST00000585268 FBLN2P98095 1184 aa14.07□□□□□ -0.16
CRLF3-206ENST00000585268 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
CRLF3-206ENST00000585268 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
CRLF3-206ENST00000585268 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
CRLF3-206ENST00000585268 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
CRLF3-206ENST00000585268 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
CRLF3-206ENST00000585268 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
CRLF3-206ENST00000585268 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
CRLF3-206ENST00000585268 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
CRLF3-206ENST00000585268 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
CRLF3-206ENST00000585268 FKBP8Q14318 412 aa13.62□□□□□ -0.23
CRLF3-206ENST00000585268 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
CRLF3-206ENST00000585268 POTEHQ6S545 545 aa13.55□□□□□ -0.24
CRLF3-206ENST00000585268 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
CRLF3-206ENST00000585268 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
CRLF3-206ENST00000585268 PROM2Q8N271 834 aa13.51□□□□□ -0.25
CRLF3-206ENST00000585268 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
CRLF3-206ENST00000585268 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
CRLF3-206ENST00000585268 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
CRLF3-206ENST00000585268 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
CRLF3-206ENST00000585268 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
CRLF3-206ENST00000585268 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
CRLF3-206ENST00000585268 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
CRLF3-206ENST00000585268 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
CRLF3-206ENST00000585268 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
CRLF3-206ENST00000585268 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
CRLF3-206ENST00000585268 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
CRLF3-206ENST00000585268 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
CRLF3-206ENST00000585268 MIER1Q8N108 512 aa12.97□□□□□ -0.33
CRLF3-206ENST00000585268 HAX1O00165 279 aa12.95□□□□□ -0.34
CRLF3-206ENST00000585268 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
CRLF3-206ENST00000585268 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
CRLF3-206ENST00000585268 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
CRLF3-206ENST00000585268 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
CRLF3-206ENST00000585268 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
CRLF3-206ENST00000585268 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
CRLF3-206ENST00000585268 EVX2Q03828 476 aa12.83□□□□□ -0.36
CRLF3-206ENST00000585268 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
CRLF3-206ENST00000585268 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
CRLF3-206ENST00000585268 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
CRLF3-206ENST00000585268 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
CRLF3-206ENST00000585268 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
CRLF3-206ENST00000585268 NUBP1P53384 320 aa12.7□□□□□ -0.38
CRLF3-206ENST00000585268 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
CRLF3-206ENST00000585268 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
CRLF3-206ENST00000585268 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
CRLF3-206ENST00000585268 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
CRLF3-206ENST00000585268 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
CRLF3-206ENST00000585268 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
CRLF3-206ENST00000585268 GABBR2O75899 941 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms