RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MCM4P33991 863 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 NOS2P35228 1153 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 EIF4A3P38919 411 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 MASP1P48740 699 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 EPHB1P54762 984 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 EIF6P56537 245 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 DHX9Q08211 1270 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 LMOD3Q0VAK6 560 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 APOBRQ0VD83 1088 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 UBE4AQ14139 1066 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 HLTFQ14527 1009 aaKnown RBP eCLIP2.62□□□□□ -1.99
RTF1-207ENST00000561076 MAP3K11Q16584 847 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 FXNQ16595 210 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 FOXD4L6Q3SYB3 417 aaPredicted RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 C4orf46Q504U0 113 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 LARP1BQ659C4 914 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 FOXD4L3Q6VB84 417 aaPredicted RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 ZNF438Q7Z4V0 828 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 RPUSD2Q8IZ73 545 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 STAG2Q8N3U4 1231 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 SYNPOQ8N3V7 929 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 PPM1EQ8WY54 764 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 BAP1Q92560 729 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 NKD1Q969G9 470 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 CCDC74AQ96AQ1 378 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 MYO19Q96H55 970 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 KCTD15Q96SI1 283 aaPredicted RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 OCSTAMPQ9BR26 566 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 IER2Q9BTL4 223 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 C2orf49Q9BVC5 232 aaPredicted RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 NOC4LQ9BVI4 516 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 CCDC113Q9H0I3 377 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 COPRSQ9NQ92 184 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 ST7Q9NRC1 585 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 GINM1Q9NU53 330 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 GOLGA6AQ9NYA3 693 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 CABP1Q9NZU7 370 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 PLAAQ9Y263 795 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 FAM221BA6H8Z2 402 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 TMEM229AB2RXF0 380 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ZBTB39O15060 712 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 SNPHO15079 494 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 SMAD7O15105 426 aaKnown RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 ASMTLO95671 621 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 LDHAP00338 332 aaKnown RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 NEFMP07197 916 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 NBPF7P0C2Y1 421 aaPredicted RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 SMTNP53814 917 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 EVA1CP58658 441 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 NFKB2Q00653 900 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 SSRP1Q08945 709 aaKnown RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 RASA3Q14644 834 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ARID5BQ14865 1188 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 TLR1Q15399 786 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 PPP2R5EQ16537 467 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 RTN1Q16799 776 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 L1TD1Q5T7N2 865 aaKnown RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 GPR153Q6NV75 609 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 NXPE4Q6UWF7 544 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 KSR2Q6VAB6 950 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ERMP1Q7Z2K6 904 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 KRT26Q7Z3Y9 468 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 TREML1Q86YW5 311 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ALDH16A1Q8IZ83 802 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ZNF511Q8NB15 262 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ANKK1Q8NFD2 765 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 EPS8L3Q8TE67 593 aaKnown RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 SNX29Q8TEQ0 813 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 THAP3Q8WTV1 239 aaPredicted RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 ZNF296Q8WUU4 475 aaPredicted RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 SCYL1Q96KG9 808 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ZFRQ96KR1 1074 aaKnown RBP2.61□□□□□ -1.99
RTF1-207ENST00000561076 TMEM74Q96NL1 305 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 RSRP1Q9BUV0 290 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 BCO2Q9BYV7 579 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 SFMBT1Q9UHJ3 866 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 TRAK1Q9UPV9 953 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 AKAP2Q9Y2D5 859 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 ATP8A1Q9Y2Q0 1164 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 HCN4Q9Y3Q4 1203 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 KDM2BQ8NHM5 1336 aa2.61□□□□□ -1.99
RTF1-207ENST00000561076 CCDC189A1A4V9 331 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 F6X3S4 739 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 ERVH48-1M5A8F1 160 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 WASLO00401 505 aaPredicted RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 ARHGAP33O14559 1287 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 KLF4O43474 513 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 NRDCO43847 1150 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 PPFIA4O75335 1185 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 ALDH1L1O75891 902 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 DDAH1O94760 285 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 RASGRP1O95267 797 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 GNRH1P01148 92 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 IFIT2P09913 472 aaKnown RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 CT47B1P0C2W7 299 aaPredicted RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 MYCLP1P12525 358 aaPredicted RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 PMLP29590 882 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 PPM1FP49593 454 aaPredicted RBP2.6□□□□□ -1.99
RTF1-207ENST00000561076 PSEN2P49810 448 aa2.6□□□□□ -1.99
RTF1-207ENST00000561076 APLP1P51693 650 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms