RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 VAMP4O75379 141 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 PTGDRQ13258 359 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 NUP188Q5SRE5 1749 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 SKAP1Q86WV1 359 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 WDR17Q8IZU2 1322 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 EXOC6Q8TAG9 804 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 SPSB2Q99619 263 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 MAP3K5Q99683 1374 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 BCL2L13Q9BXK5 485 aa7.65□□□□□ -1.18
ATXN3-230ENST00000554673 MYH14Q7Z406 1995 aaKnown RBP7.64□□□□□ -1.19
ATXN3-230ENST00000554673 PRAMEF22A3QJZ6 481 aa7.64□□□□□ -1.19
ATXN3-230ENST00000554673 TCERG1O14776 1098 aaKnown RBP7.64□□□□□ -1.19
ATXN3-230ENST00000554673 CYP4X1Q8N118 509 aa7.64□□□□□ -1.19
ATXN3-230ENST00000554673 RETREG2Q8NC44 543 aa7.64□□□□□ -1.19
ATXN3-230ENST00000554673 CRBNQ96SW2 442 aa7.64□□□□□ -1.19
ATXN3-230ENST00000554673 HSPA1LP34931 641 aa7.63□□□□□ -1.19
ATXN3-230ENST00000554673 RREB1Q92766 1687 aa7.63□□□□□ -1.19
ATXN3-230ENST00000554673 TNS2Q63HR2 1409 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 CASZ1Q86V15 1759 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 MAPK8IP3Q9UPT6 1336 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 UBAP1LF5GYI3 381 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
ATXN3-230ENST00000554673 SKIV2LQ15477 1246 aaKnown RBP7.62□□□□□ -1.19
ATXN3-230ENST00000554673 TMCO4Q5TGY1 634 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 MPRIPQ6WCQ1 1025 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 G2E3Q7L622 706 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 PTF1AQ7RTS3 328 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 PANK1Q8TE04 598 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 PRDM11Q9NQV5 511 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 IFT57Q9NWB7 429 aa7.62□□□□□ -1.19
ATXN3-230ENST00000554673 CICQ96RK0 1608 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-230ENST00000554673 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 COL5A3P25940 1745 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-230ENST00000554673 ELL2O00472 640 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-230ENST00000554673 PHKG2P15735 406 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 IRF5Q13568 498 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 NGEFQ8N5V2 710 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 BTG4Q9NY30 223 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 MTMR7Q9Y216 660 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 COG6Q9Y2V7 657 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
ATXN3-230ENST00000554673 TUBGCP6Q96RT7 1819 aa7.61□□□□□ -1.19
ATXN3-230ENST00000554673 BTAF1O14981 1849 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 TAF1LQ8IZX4 1826 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
ATXN3-230ENST00000554673 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-230ENST00000554673 LRP10Q7Z4F1 713 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 CRIPAKQ8N1N5 446 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 NLRP2Q9NX02 1062 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 TOR4AQ9NXH8 423 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
ATXN3-230ENST00000554673 SPATA31A1Q5TZJ5 1347 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.59□□□□□ -1.19
ATXN3-230ENST00000554673 TTC24A2A3L6 582 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-230ENST00000554673 GNAT3A8MTJ3 354 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 ADAMTS2O95450 1211 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 AVPP01185 164 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 TRIM27P14373 513 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 RPIAP49247 311 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 MFAP1P55081 439 aaKnown RBP7.59□□□□□ -1.19
ATXN3-230ENST00000554673 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
ATXN3-230ENST00000554673 PROSER3Q2NL68 480 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 B4GALNT3Q6L9W6 998 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 CARD10Q9BWT7 1032 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 STRN4Q9NRL3 753 aa7.59□□□□□ -1.19
ATXN3-230ENST00000554673 KDM2BQ8NHM5 1336 aa7.58□□□□□ -1.2
ATXN3-230ENST00000554673 NHSQ6T4R5 1651 aa7.58□□□□□ -1.2
ATXN3-230ENST00000554673 EIF4A1P60842 406 aaKnown RBP7.58□□□□□ -1.2
ATXN3-230ENST00000554673 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-230ENST00000554673 SLC39A6Q13433 755 aa7.58□□□□□ -1.2
ATXN3-230ENST00000554673 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATXN3-230ENST00000554673 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
ATXN3-230ENST00000554673 LY75O60449 1722 aa7.58□□□□□ -1.2
ATXN3-230ENST00000554673 JCADQ9P266 1359 aa7.58□□□□□ -1.2
ATXN3-230ENST00000554673 COL4A1P02462 1669 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 AFDNP55196 1824 aaKnown RBP7.57□□□□□ -1.2
ATXN3-230ENST00000554673 SPATA31A5Q5VU36 1347 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 SPATA31A7Q8IWB4 1347 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 KAT6BQ8WYB5 2073 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 NUTM2BA6NNL0 878 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-230ENST00000554673 NUTM2EB1AL46 878 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-230ENST00000554673 ANXA1P04083 346 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 CTC1Q2NKJ3 1217 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 AKAP4Q5JQC9 854 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 NUTM2AQ8IVF1 878 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-230ENST00000554673 RDH13Q8NBN7 331 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 GZF1Q9H116 711 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-230ENST00000554673 PCDHB15Q9Y5E8 787 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 ATRNO75882 1429 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 PLEKHG2Q9H7P9 1386 aa7.57□□□□□ -1.2
ATXN3-230ENST00000554673 ABCC4O15439 1325 aa7.56□□□□□ -1.2
ATXN3-230ENST00000554673 ATP10DQ9P241 1426 aa7.56□□□□□ -1.2
ATXN3-230ENST00000554673 HTATSF1O43719 755 aaKnown RBP7.56□□□□□ -1.2
ATXN3-230ENST00000554673 TOM1O60784 492 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms