RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 METTL14Q9HCE5 456 aaKnown RBP11.23□□□□□ -0.61
PPFIA2-228ENST00000553058 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 NR1I2O75469 434 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 BMS1Q14692 1282 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 MSS51Q4VC12 460 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 MCF2L2Q86YR7 1114 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 NIF3L1Q9GZT8 377 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 PCDHGB7Q9Y5F8 929 aa11.22□□□□□ -0.61
PPFIA2-228ENST00000553058 E9PCH4 1651 aa11.21□□□□□ -0.61
PPFIA2-228ENST00000553058 IQGAP3Q86VI3 1631 aa11.21□□□□□ -0.61
PPFIA2-228ENST00000553058 ERFEQ4G0M1 354 aa11.21□□□□□ -0.61
PPFIA2-228ENST00000553058 VPS37DQ86XT2 251 aa11.21□□□□□ -0.61
PPFIA2-228ENST00000553058 CRELD1Q96HD1 420 aa11.21□□□□□ -0.61
PPFIA2-228ENST00000553058 DMGDHQ9UI17 866 aaKnown RBP11.21□□□□□ -0.61
PPFIA2-228ENST00000553058 GCC2Q8IWJ2 1684 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 NUP155O75694 1391 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 CTSHP09668 335 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 STIM2Q9P246 746 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 PPME1Q9Y570 386 aa11.2□□□□□ -0.62
PPFIA2-228ENST00000553058 MYO5BQ9ULV0 1848 aa11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 MMP16P51512 607 aa11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
PPFIA2-228ENST00000553058 PTPRUQ92729 1446 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 TMEM229AB2RXF0 380 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 MYCP01106 439 aaPredicted RBP11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 FGRP09769 529 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 HOXB1P14653 301 aaPredicted RBP11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 HSD3B2P26439 372 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 SRA1Q9HD15 236 aaKnown RBP11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 MRPL42Q9Y6G3 142 aaKnown RBP11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 AK5Q9Y6K8 562 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 CHD2O14647 1828 aaKnown RBP11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
PPFIA2-228ENST00000553058 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 PIK3R4Q99570 1358 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 CLSTN1O94985 981 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 ANAPC15P60006 121 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 SLC10A4Q96EP9 437 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 CFHR5Q9BXR6 569 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 BRINP2Q9C0B6 783 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 KLHL42Q9P2K6 505 aa11.17□□□□□ -0.62
PPFIA2-228ENST00000553058 MSH6P52701 1360 aa11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 COX20Q5RI15 118 aa11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 PTCRAQ6ISU1 281 aaPredicted RBP11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 SEPT12Q8IYM1 358 aa11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 NOP58Q9Y2X3 529 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 RRBP1Q9P2E9 1410 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-228ENST00000553058 PTPN12Q05209 780 aaKnown RBP11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 NFE2L2Q16236 605 aa11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 TSPAN10Q9H1Z9 355 aaPredicted RBP11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 PRDM9Q9NQV7 894 aa11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 SUGT1Q9Y2Z0 365 aa11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
PPFIA2-228ENST00000553058 NRXN3Q9Y4C0 1643 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 A0A1W2PRU2 124 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 BACH1O14867 736 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 RNF187Q5TA31 235 aaPredicted RBP11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 BPHLQ86WA6 291 aaPredicted RBP11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 GJD3Q8N144 294 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 FBF1Q8TES7 1133 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 MRFAP1L1Q96HT8 127 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 NAIPQ13075 1403 aa11.14□□□□□ -0.63
PPFIA2-228ENST00000553058 ZBTB39O15060 712 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 APLP1P51693 650 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 EPHA4P54764 986 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 AGERQ15109 404 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 ABTB2Q8N961 1025 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 SRCAPQ6ZRS2 3230 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 METP08581 1390 aa11.13□□□□□ -0.63
PPFIA2-228ENST00000553058 SETBP1Q9Y6X0 1596 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 GJA8P48165 433 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 CCDC181Q5TID7 509 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms