RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
PPFIA2-228ENST00000553058 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
PPFIA2-228ENST00000553058 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
PPFIA2-228ENST00000553058 PLPPR3Q6T4P5 718 aa20.51■□□□□ 0.87
PPFIA2-228ENST00000553058 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
PPFIA2-228ENST00000553058 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
PPFIA2-228ENST00000553058 KCNA4P22459 653 aa19.51■□□□□ 0.71
PPFIA2-228ENST00000553058 ADRA2BP18089 450 aa19.24■□□□□ 0.67
PPFIA2-228ENST00000553058 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
PPFIA2-228ENST00000553058 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
PPFIA2-228ENST00000553058 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
PPFIA2-228ENST00000553058 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
PPFIA2-228ENST00000553058 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
PPFIA2-228ENST00000553058 FOXD1Q16676 465 aa18.28■□□□□ 0.52
PPFIA2-228ENST00000553058 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
PPFIA2-228ENST00000553058 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
PPFIA2-228ENST00000553058 RTN4Q9NQC3 1192 aaKnown RBP18.16■□□□□ 0.5
PPFIA2-228ENST00000553058 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
PPFIA2-228ENST00000553058 ZBTB22O15209 634 aa18.01■□□□□ 0.47
PPFIA2-228ENST00000553058 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
PPFIA2-228ENST00000553058 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
PPFIA2-228ENST00000553058 FOXD4L1Q9NU39 408 aa17.5■□□□□ 0.39
PPFIA2-228ENST00000553058 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
PPFIA2-228ENST00000553058 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
PPFIA2-228ENST00000553058 FKBP8Q14318 412 aa17.12■□□□□ 0.33
PPFIA2-228ENST00000553058 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
PPFIA2-228ENST00000553058 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
PPFIA2-228ENST00000553058 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
PPFIA2-228ENST00000553058 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
PPFIA2-228ENST00000553058 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
PPFIA2-228ENST00000553058 PLCB2Q00722 1185 aa16.62■□□□□ 0.25
PPFIA2-228ENST00000553058 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
PPFIA2-228ENST00000553058 ABCC9O60706 1549 aa16.53■□□□□ 0.24
PPFIA2-228ENST00000553058 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
PPFIA2-228ENST00000553058 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
PPFIA2-228ENST00000553058 BCANQ96GW7 911 aa16.46■□□□□ 0.23
PPFIA2-228ENST00000553058 HAP1P54257 671 aaPredicted RBP16.4■□□□□ 0.22
PPFIA2-228ENST00000553058 MSH5O43196 834 aa16.38■□□□□ 0.21
PPFIA2-228ENST00000553058 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
PPFIA2-228ENST00000553058 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
PPFIA2-228ENST00000553058 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
PPFIA2-228ENST00000553058 TPRNQ4KMQ1 711 aa16.09■□□□□ 0.17
PPFIA2-228ENST00000553058 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
PPFIA2-228ENST00000553058 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
PPFIA2-228ENST00000553058 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
PPFIA2-228ENST00000553058 ATF5Q9Y2D1 282 aaPredicted RBP16.05■□□□□ 0.16
PPFIA2-228ENST00000553058 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
PPFIA2-228ENST00000553058 VASPP50552 380 aaPredicted RBP15.85■□□□□ 0.13
PPFIA2-228ENST00000553058 PKD2Q13563 968 aa15.8■□□□□ 0.12
PPFIA2-228ENST00000553058 FBLN2P98095 1184 aa15.78■□□□□ 0.12
PPFIA2-228ENST00000553058 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
PPFIA2-228ENST00000553058 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
PPFIA2-228ENST00000553058 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.73■□□□□ 0.11
PPFIA2-228ENST00000553058 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
PPFIA2-228ENST00000553058 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
PPFIA2-228ENST00000553058 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
PPFIA2-228ENST00000553058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
PPFIA2-228ENST00000553058 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
PPFIA2-228ENST00000553058 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
PPFIA2-228ENST00000553058 PROM2Q8N271 834 aa15.68■□□□□ 0.1
PPFIA2-228ENST00000553058 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
PPFIA2-228ENST00000553058 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
PPFIA2-228ENST00000553058 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
PPFIA2-228ENST00000553058 TULP1O00294 542 aaPredicted RBP15.61■□□□□ 0.09
PPFIA2-228ENST00000553058 NACADO15069 1562 aa15.61■□□□□ 0.09
PPFIA2-228ENST00000553058 CFAP44Q96MT7 982 aa15.59■□□□□ 0.09
PPFIA2-228ENST00000553058 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
PPFIA2-228ENST00000553058 NPM1P06748 294 aaKnown RBP eCLIP15.56■□□□□ 0.08
PPFIA2-228ENST00000553058 ARXQ96QS3 562 aa15.56■□□□□ 0.08
PPFIA2-228ENST00000553058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
PPFIA2-228ENST00000553058 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
PPFIA2-228ENST00000553058 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
PPFIA2-228ENST00000553058 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
PPFIA2-228ENST00000553058 MYO15BQ96JP2 1530 aa15.44■□□□□ 0.06
PPFIA2-228ENST00000553058 ECM2O94769 699 aaPredicted RBP15.42■□□□□ 0.06
PPFIA2-228ENST00000553058 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
PPFIA2-228ENST00000553058 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
PPFIA2-228ENST00000553058 SPRYD3Q8NCJ5 442 aa15.42■□□□□ 0.06
PPFIA2-228ENST00000553058 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
PPFIA2-228ENST00000553058 NBR1Q14596 966 aa15.36■□□□□ 0.05
PPFIA2-228ENST00000553058 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.05
PPFIA2-228ENST00000553058 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
PPFIA2-228ENST00000553058 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
PPFIA2-228ENST00000553058 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
PPFIA2-228ENST00000553058 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
PPFIA2-228ENST00000553058 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
PPFIA2-228ENST00000553058 RGL2O15211 777 aa15.25■□□□□ 0.03
PPFIA2-228ENST00000553058 DCAF1Q9Y4B6 1507 aa15.24■□□□□ 0.03
PPFIA2-228ENST00000553058 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
PPFIA2-228ENST00000553058 HOMEZQ8IX15 550 aa15.19■□□□□ 0.02
PPFIA2-228ENST00000553058 APLP2Q06481 763 aa15.17■□□□□ 0.02
PPFIA2-228ENST00000553058 TMEM132AQ24JP5 1023 aa15.16■□□□□ 0.02
PPFIA2-228ENST00000553058 CHGAP10645 457 aaKnown RBP15.09■□□□□ 0.01
PPFIA2-228ENST00000553058 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
PPFIA2-228ENST00000553058 C14orf37Q86TY3 774 aa15.03■□□□□ -0
PPFIA2-228ENST00000553058 SCRIBQ14160 1630 aa15.02□□□□□ -0.01
PPFIA2-228ENST00000553058 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
PPFIA2-228ENST00000553058 CECR2Q9BXF3 1484 aa14.9□□□□□ -0.02
PPFIA2-228ENST00000553058 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
PPFIA2-228ENST00000553058 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms