RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 SENP3-EIF4A1A0A087X0R7 540 aa10.39□□□□□ -0.75
NPAS3-208ENST00000550662 XYLBO75191 536 aa10.39□□□□□ -0.75
NPAS3-208ENST00000550662 FAM157BP0CG42 384 aa10.39□□□□□ -0.75
NPAS3-208ENST00000550662 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
NPAS3-208ENST00000550662 H7C1W4 665 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 PHACTR2O75167 634 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 PTSQ03393 145 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
NPAS3-208ENST00000550662 PMEPA1Q969W9 287 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 CFHR5Q9BXR6 569 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 ZCCHC2Q9C0B9 1178 aaKnown RBP10.38□□□□□ -0.75
NPAS3-208ENST00000550662 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
NPAS3-208ENST00000550662 SCAMP3O14828 347 aaKnown RBP10.37□□□□□ -0.75
NPAS3-208ENST00000550662 GIPC1O14908 333 aa10.37□□□□□ -0.75
NPAS3-208ENST00000550662 GRNP28799 593 aaKnown RBP10.37□□□□□ -0.75
NPAS3-208ENST00000550662 LAMC2Q13753 1193 aa10.37□□□□□ -0.75
NPAS3-208ENST00000550662 SETDB2Q96T68 719 aa10.37□□□□□ -0.75
NPAS3-208ENST00000550662 ZFYVE28Q9HCC9 887 aa10.37□□□□□ -0.75
NPAS3-208ENST00000550662 VTI1BQ9UEU0 232 aa10.37□□□□□ -0.75
NPAS3-208ENST00000550662 FOXD3Q9UJU5 478 aaPredicted RBP10.37□□□□□ -0.75
NPAS3-208ENST00000550662 SLC35F4A4IF30 521 aa10.36□□□□□ -0.75
NPAS3-208ENST00000550662 ATXN7O15265 892 aaPredicted RBP10.36□□□□□ -0.75
NPAS3-208ENST00000550662 RIPOR1Q6ZS17 1223 aa10.36□□□□□ -0.75
NPAS3-208ENST00000550662 GMCL1Q96IK5 515 aa10.36□□□□□ -0.75
NPAS3-208ENST00000550662 FAM161BQ96MY7 647 aa10.36□□□□□ -0.75
NPAS3-208ENST00000550662 ABI2Q9NYB9 513 aaPredicted RBP10.36□□□□□ -0.75
NPAS3-208ENST00000550662 CCDC74AQ96AQ1 378 aa10.35□□□□□ -0.75
NPAS3-208ENST00000550662 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
NPAS3-208ENST00000550662 TMEM63CQ9P1W3 806 aa10.35□□□□□ -0.75
NPAS3-208ENST00000550662 AK5Q9Y6K8 562 aa10.35□□□□□ -0.75
NPAS3-208ENST00000550662 EFSO43281 561 aa10.34□□□□□ -0.75
NPAS3-208ENST00000550662 KRT76Q01546 638 aa10.34□□□□□ -0.75
NPAS3-208ENST00000550662 TTC39BQ5VTQ0 682 aaPredicted RBP10.34□□□□□ -0.75
NPAS3-208ENST00000550662 EFCC1Q9HA90 598 aa10.34□□□□□ -0.75
NPAS3-208ENST00000550662 NLRP2Q9NX02 1062 aa10.34□□□□□ -0.75
NPAS3-208ENST00000550662 CCINQ13939 588 aa10.33□□□□□ -0.76
NPAS3-208ENST00000550662 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
NPAS3-208ENST00000550662 TMEM87AQ8NBN3 555 aa10.33□□□□□ -0.76
NPAS3-208ENST00000550662 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
NPAS3-208ENST00000550662 METTL5Q9NRN9 209 aaKnown RBP10.33□□□□□ -0.76
NPAS3-208ENST00000550662 RNF19AQ9NV58 838 aa10.33□□□□□ -0.76
NPAS3-208ENST00000550662 EIF4BP23588 611 aaKnown RBP10.32□□□□□ -0.76
NPAS3-208ENST00000550662 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
NPAS3-208ENST00000550662 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
NPAS3-208ENST00000550662 KHNYNO15037 678 aaKnown RBP10.31□□□□□ -0.76
NPAS3-208ENST00000550662 TNP2Q05952 138 aa10.31□□□□□ -0.76
NPAS3-208ENST00000550662 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
NPAS3-208ENST00000550662 GALNT12Q8IXK2 581 aa10.31□□□□□ -0.76
NPAS3-208ENST00000550662 CRELD1Q96HD1 420 aa10.31□□□□□ -0.76
NPAS3-208ENST00000550662 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
NPAS3-208ENST00000550662 CHRDQ9H2X0 955 aa10.31□□□□□ -0.76
NPAS3-208ENST00000550662 CES1P23141 567 aa10.3□□□□□ -0.76
NPAS3-208ENST00000550662 SFSWAPQ12872 951 aaKnown RBP10.3□□□□□ -0.76
NPAS3-208ENST00000550662 UBAP2LQ14157 1087 aaKnown RBP10.3□□□□□ -0.76
NPAS3-208ENST00000550662 LDLRAD1Q5T700 205 aa10.3□□□□□ -0.76
NPAS3-208ENST00000550662 C1orf127Q8N9H9 656 aa10.3□□□□□ -0.76
NPAS3-208ENST00000550662 GSX2Q9BZM3 304 aa10.3□□□□□ -0.76
NPAS3-208ENST00000550662 MARK1Q9P0L2 795 aa10.3□□□□□ -0.76
NPAS3-208ENST00000550662 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 THBS1P07996 1170 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 MAPTP10636 758 aaKnown RBP10.29□□□□□ -0.76
NPAS3-208ENST00000550662 C8orf37Q96NL8 207 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 CNTNAP3BQ96NU0 1288 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 CNTNAP3Q9BZ76 1288 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 C12orf49Q9H741 205 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 NDFIP2Q9NV92 336 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 CNTN3Q9P232 1028 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 PHF24Q9UPV7 400 aa10.29□□□□□ -0.76
NPAS3-208ENST00000550662 EREGO14944 169 aa10.28□□□□□ -0.76
NPAS3-208ENST00000550662 SASH3O75995 380 aa10.28□□□□□ -0.76
NPAS3-208ENST00000550662 DBN1Q16643 649 aa10.28□□□□□ -0.76
NPAS3-208ENST00000550662 EPS8L3Q8TE67 593 aaKnown RBP10.28□□□□□ -0.76
NPAS3-208ENST00000550662 PNMA5Q96PV4 448 aa10.28□□□□□ -0.76
NPAS3-208ENST00000550662 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
NPAS3-208ENST00000550662 EDN3P14138 238 aa10.27□□□□□ -0.77
NPAS3-208ENST00000550662 OR13H1Q8NG92 308 aa10.27□□□□□ -0.77
NPAS3-208ENST00000550662 RNF34Q969K3 372 aa10.27□□□□□ -0.77
NPAS3-208ENST00000550662 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.77
NPAS3-208ENST00000550662 NPHS2Q9NP85 383 aa10.27□□□□□ -0.77
NPAS3-208ENST00000550662 FAM8A1Q9UBU6 413 aa10.27□□□□□ -0.77
NPAS3-208ENST00000550662 ATXN7L1Q9ULK2 861 aaPredicted RBP10.27□□□□□ -0.77
NPAS3-208ENST00000550662 BNIP3LO60238 219 aa10.26□□□□□ -0.77
NPAS3-208ENST00000550662 RARAP10276 462 aa10.26□□□□□ -0.77
NPAS3-208ENST00000550662 ITGA6P23229 1130 aa10.26□□□□□ -0.77
NPAS3-208ENST00000550662 ZC3H6P61129 1189 aaKnown RBP10.26□□□□□ -0.77
NPAS3-208ENST00000550662 HDLBPQ00341 1268 aaKnown RBP10.26□□□□□ -0.77
NPAS3-208ENST00000550662 PPP4R2Q9NY27 417 aa10.26□□□□□ -0.77
NPAS3-208ENST00000550662 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.26□□□□□ -0.77
NPAS3-208ENST00000550662 GADD45BO75293 160 aaPredicted RBP10.25□□□□□ -0.77
NPAS3-208ENST00000550662 MAP3K6O95382 1288 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 TARSP26639 723 aaKnown RBP10.25□□□□□ -0.77
NPAS3-208ENST00000550662 ERCC5P28715 1186 aaPredicted RBP10.25□□□□□ -0.77
NPAS3-208ENST00000550662 IRS1P35568 1242 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 SOX18P35713 384 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 ZNF76P36508 570 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 GSK3AP49840 483 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms