RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 WNT7BP56706 349 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 FOXC1Q12948 553 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
PRKDC-211ENST00000546304 NHSQ6T4R5 1651 aa8.44□□□□□ -1.06
PRKDC-211ENST00000546304 KCNH2Q12809 1159 aa8.44□□□□□ -1.06
PRKDC-211ENST00000546304 RAPGEF4Q8WZA2 1011 aa8.44□□□□□ -1.06
PRKDC-211ENST00000546304 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
PRKDC-211ENST00000546304 NUDCQ9Y266 331 aa8.44□□□□□ -1.06
PRKDC-211ENST00000546304 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
PRKDC-211ENST00000546304 TNS1Q9HBL0 1735 aaKnown RBP8.43□□□□□ -1.06
PRKDC-211ENST00000546304 SCN11AQ9UI33 1791 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 LCE2BO14633 110 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 DGAT1O75907 488 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 HMOX1P09601 288 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
PRKDC-211ENST00000546304 NEUROD2Q15784 382 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 SULT6B1Q6IMI4 303 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 SEPT12Q8IYM1 358 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 MRS2Q9HD23 443 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 TOR4AQ9NXH8 423 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 ADAMTS7Q9UKP4 1686 aa8.43□□□□□ -1.06
PRKDC-211ENST00000546304 U2AF1L5P0DN76 240 aaPredicted RBP8.42□□□□□ -1.06
PRKDC-211ENST00000546304 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
PRKDC-211ENST00000546304 SKOR1P84550 965 aa8.42□□□□□ -1.06
PRKDC-211ENST00000546304 U2AF1Q01081 240 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRKDC-211ENST00000546304 WDR43Q15061 677 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRKDC-211ENST00000546304 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
PRKDC-211ENST00000546304 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
PRKDC-211ENST00000546304 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRKDC-211ENST00000546304 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
PRKDC-211ENST00000546304 ITGB4P16144 1822 aa8.42□□□□□ -1.06
PRKDC-211ENST00000546304 PCDH11XQ9BZA7 1347 aa8.41□□□□□ -1.06
PRKDC-211ENST00000546304 PCDH11YQ9BZA8 1340 aa8.41□□□□□ -1.06
PRKDC-211ENST00000546304 F12P00748 615 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-211ENST00000546304 DDB1Q16531 1140 aa8.41□□□□□ -1.06
PRKDC-211ENST00000546304 CCDC184Q52MB2 194 aa8.41□□□□□ -1.06
PRKDC-211ENST00000546304 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
PRKDC-211ENST00000546304 BTAF1O14981 1849 aa8.4□□□□□ -1.06
PRKDC-211ENST00000546304 RGPD3A6NKT7 1758 aaPredicted RBP8.4□□□□□ -1.06
PRKDC-211ENST00000546304 SIPA1L3O60292 1781 aaPredicted RBP8.4□□□□□ -1.06
PRKDC-211ENST00000546304 RGPD4Q7Z3J3 1758 aa8.4□□□□□ -1.06
PRKDC-211ENST00000546304 MRC1P22897 1456 aa8.4□□□□□ -1.06
PRKDC-211ENST00000546304 PRKAR2BP31323 418 aa8.4□□□□□ -1.06
PRKDC-211ENST00000546304 RC3H1Q5TC82 1133 aaKnown RBP8.4□□□□□ -1.06
PRKDC-211ENST00000546304 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
PRKDC-211ENST00000546304 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
PRKDC-211ENST00000546304 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
PRKDC-211ENST00000546304 BCL9O00512 1426 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 CCER2I3L3R5 266 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 KRT27Q7Z3Y8 459 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
PRKDC-211ENST00000546304 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 PAPPAQ13219 1627 aa8.39□□□□□ -1.07
PRKDC-211ENST00000546304 KDM6AO15550 1401 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-211ENST00000546304 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
PRKDC-211ENST00000546304 MAPK8IP3Q9UPT6 1336 aa8.38□□□□□ -1.07
PRKDC-211ENST00000546304 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
PRKDC-211ENST00000546304 EXOC5O00471 708 aa8.38□□□□□ -1.07
PRKDC-211ENST00000546304 PDE3BQ13370 1112 aa8.38□□□□□ -1.07
PRKDC-211ENST00000546304 AMOTQ4VCS5 1084 aa8.38□□□□□ -1.07
PRKDC-211ENST00000546304 ZNF530Q6P9A1 599 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-211ENST00000546304 SNIP1Q8TAD8 396 aaKnown RBP8.38□□□□□ -1.07
PRKDC-211ENST00000546304 ZCRB1Q8TBF4 217 aaKnown RBP8.38□□□□□ -1.07
PRKDC-211ENST00000546304 CYP27B1O15528 508 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 NEFMP07197 916 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 CTHP32929 405 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 SH3BP2P78314 561 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 PLEKHO1Q53GL0 409 aaPredicted RBP8.37□□□□□ -1.07
PRKDC-211ENST00000546304 MARCH10Q8NA82 808 aaPredicted RBP8.37□□□□□ -1.07
PRKDC-211ENST00000546304 GAS2L2Q8NHY3 880 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 PNISRQ8TF01 805 aaKnown RBP8.37□□□□□ -1.07
PRKDC-211ENST00000546304 TSC1Q92574 1164 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
PRKDC-211ENST00000546304 UBR2Q8IWV8 1755 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 TTC24A2A3L6 582 aaPredicted RBP8.36□□□□□ -1.07
PRKDC-211ENST00000546304 PHKG2P15735 406 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 C1orf141Q5JVX7 400 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 ILDR2Q71H61 639 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
PRKDC-211ENST00000546304 BAP1Q92560 729 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 PHACTR3Q96KR7 559 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 PLEKHF1Q96S99 279 aa8.36□□□□□ -1.07
PRKDC-211ENST00000546304 PNNQ9H307 717 aaKnown RBP8.36□□□□□ -1.07
PRKDC-211ENST00000546304 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 LY75O60449 1722 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 RREB1Q92766 1687 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 AVPP01185 164 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
PRKDC-211ENST00000546304 IFNL2Q8IZJ0 200 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 IL27Q8NEV9 243 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 RUNDC1Q96C34 613 aa8.35□□□□□ -1.07
PRKDC-211ENST00000546304 CICQ96RK0 1608 aaPredicted RBP8.34□□□□□ -1.07
PRKDC-211ENST00000546304 SIAH2O43255 324 aa8.34□□□□□ -1.07
PRKDC-211ENST00000546304 HSP90AB1P08238 724 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms