RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 CCDC34Q96HJ3 373 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 USP6P35125 1406 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 PES1O00541 588 aaKnown RBP18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 PROSER3Q2NL68 480 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 RRP12Q5JTH9 1297 aaKnown RBP18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 LMBR1LQ6UX01 489 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 IL25Q9H293 177 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 EVA1CP58658 441 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 TFCP2Q12800 502 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
ATP2A2-204ENST00000539276 RIOK3O14730 519 aaKnown RBP18.39■□□□□ 0.54
ATP2A2-204ENST00000539276 RPS6KB1P23443 525 aa18.39■□□□□ 0.54
ATP2A2-204ENST00000539276 ZC3H13Q5T200 1668 aaKnown RBP18.39■□□□□ 0.54
ATP2A2-204ENST00000539276 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
ATP2A2-204ENST00000539276 APOBRQ0VD83 1088 aa18.39■□□□□ 0.53
ATP2A2-204ENST00000539276 STX1AQ16623 288 aa18.39■□□□□ 0.53
ATP2A2-204ENST00000539276 CBX8Q9HC52 389 aa18.39■□□□□ 0.53
ATP2A2-204ENST00000539276 RASSF8Q8NHQ8 419 aa18.39■□□□□ 0.53
ATP2A2-204ENST00000539276 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
ATP2A2-204ENST00000539276 MCMDC2Q4G0Z9 681 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 GCP02774 474 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 LEO1Q8WVC0 666 aaPredicted RBP18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 CCDC94Q9BW85 323 aaPredicted RBP18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 HMGB1P09429 215 aaKnown RBP18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 SKILP12757 684 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.537e-8■■■□□ 16
ATP2A2-204ENST00000539276 LRMPQ12912 555 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 DDX21Q9NR30 783 aaKnown RBP eCLIP18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
ATP2A2-204ENST00000539276 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 DBNDD2Q9BQY9 259 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 TLR7Q9NYK1 1049 aaKnown RBP18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 MYO3AQ8NEV4 1616 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 CTAGE5O15320 804 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 ERCC4Q92889 916 aaPredicted RBP18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 PYCARDQ9ULZ3 195 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
ATP2A2-204ENST00000539276 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 GOLGA8BA8MQT2 603 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 CFAP100Q494V2 611 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 CNNM1Q9NRU3 951 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 NCOA5Q9HCD5 579 aaKnown RBP18.36■□□□□ 0.53
ATP2A2-204ENST00000539276 AOPEPQ8N6M6 819 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 HOXB7P09629 217 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 PTPDC1A2A3K4 754 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 TIMM10P62072 90 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 CPS1P31327 1500 aa18.35■□□□□ 0.53
ATP2A2-204ENST00000539276 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 CCDC82Q8N4S0 544 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 HOOK1Q9UJC3 728 aaKnown RBP18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 NR1I2O75469 434 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 ARGLU1Q9NWB6 273 aaPredicted RBP18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 HSP90AB3PQ58FF7 597 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 TTLL5Q6EMB2 1281 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
ATP2A2-204ENST00000539276 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.53
ATP2A2-204ENST00000539276 JMYQ8N9B5 988 aa18.33■□□□□ 0.53
ATP2A2-204ENST00000539276 PPLO60437 1756 aa18.33■□□□□ 0.52
ATP2A2-204ENST00000539276 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
ATP2A2-204ENST00000539276 U2AF2P26368 475 aaKnown RBP eCLIP18.33■□□□□ 0.521e-6■□□□□ 11.2
ATP2A2-204ENST00000539276 POLA2Q14181 598 aa18.33■□□□□ 0.52
ATP2A2-204ENST00000539276 PIK3C2BO00750 1634 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 ERICH2A1L162 156 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 CRB1P82279 1406 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 HSP90AA4PQ58FG1 418 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 OTUD7BQ6GQQ9 843 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 CLSTN2Q9H4D0 955 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
ATP2A2-204ENST00000539276 ERICH4A6NGS2 130 aa18.31■□□□□ 0.52
ATP2A2-204ENST00000539276 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
ATP2A2-204ENST00000539276 DHX32Q7L7V1 743 aaKnown RBP18.31■□□□□ 0.52
ATP2A2-204ENST00000539276 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
ATP2A2-204ENST00000539276 KLF18A0A0U1RQI7 1052 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms