RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
CSDE1-214ENST00000530886 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
CSDE1-214ENST00000530886 CCDC150Q8NCX0 1101 aa9.5□□□□□ -0.89
CSDE1-214ENST00000530886 LAMA4Q16363 1823 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 SEC31AO94979 1220 aaKnown RBP9.49□□□□□ -0.89
CSDE1-214ENST00000530886 BRD3Q15059 726 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 ERC1Q8IUD2 1116 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 CCDC151A5D8V7 595 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 H3BQF6 201 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 CHMLP26374 656 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.49□□□□□ -0.89
CSDE1-214ENST00000530886 NPHP3Q7Z494 1330 aa9.49□□□□□ -0.89
CSDE1-214ENST00000530886 DDX60Q8IY21 1712 aaKnown RBP9.49□□□□□ -0.89
CSDE1-214ENST00000530886 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 RABGGTAQ92696 567 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 STAP2Q9UGK3 403 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 LIMCH1Q9UPQ0 1083 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 PPFIA4O75335 1185 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 LIG1P18858 919 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 KRT85P78386 507 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 E2F4Q16254 413 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 LRCH2Q5VUJ6 765 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 GOLIM4O00461 696 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 PSME1Q06323 249 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 NFE2L2Q16236 605 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 MAP9Q49MG5 647 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 TRMT1Q9NXH9 659 aaKnown RBP9.48□□□□□ -0.89
CSDE1-214ENST00000530886 SMC3Q9UQE7 1217 aa9.48□□□□□ -0.89
CSDE1-214ENST00000530886 KLHL33A6NCF5 533 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 NPHP1O15259 732 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 GIGYF1O75420 1035 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-214ENST00000530886 USP5P45974 858 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 DDR1Q08345 913 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 TRIM65Q6PJ69 517 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 LRRC31Q6UY01 552 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 RUFY3Q7L099 469 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 TRAK1Q9UPV9 953 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 AOX1Q06278 1338 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 FANCGO15287 622 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 GNAI3P08754 354 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 ERCC3P19447 782 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 FCHSD1Q86WN1 690 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 UNC5CLQ8IV45 518 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 DNAAF4Q8WXU2 420 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 SCAND2PQ9GZW5 306 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-214ENST00000530886 PARP3Q9Y6F1 533 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 ABCC6O95255 1503 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 ATP7BP35670 1465 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 GOLGA6L19H0YKK7 550 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 DNAJC21Q5F1R6 531 aaKnown RBP9.47□□□□□ -0.89
CSDE1-214ENST00000530886 NBPF10Q6P3W6 841 aaKnown RBP9.47□□□□□ -0.89
CSDE1-214ENST00000530886 CHMP7Q8WUX9 453 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-214ENST00000530886 KCNB2Q92953 911 aa9.47□□□□□ -0.89
CSDE1-214ENST00000530886 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
CSDE1-214ENST00000530886 MED1Q15648 1581 aaPredicted RBP9.46□□□□□ -0.89
CSDE1-214ENST00000530886 CTAGE5O15320 804 aa9.46□□□□□ -0.89
CSDE1-214ENST00000530886 SMC2O95347 1197 aa9.46□□□□□ -0.89
CSDE1-214ENST00000530886 EVCP57679 992 aa9.46□□□□□ -0.89
CSDE1-214ENST00000530886 DNAJC25Q9H1X3 360 aa9.46□□□□□ -0.89
CSDE1-214ENST00000530886 DACT1Q9NYF0 836 aa9.46□□□□□ -0.89
CSDE1-214ENST00000530886 RIMS1Q86UR5 1692 aaKnown RBP9.46□□□□□ -0.89
CSDE1-214ENST00000530886 ATXN2Q99700 1313 aaKnown RBP9.46□□□□□ -0.89
CSDE1-214ENST00000530886 LARGE1O95461 756 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 TWISTNBQ3B726 338 aaPredicted RBP9.46□□□□□ -0.9
CSDE1-214ENST00000530886 FOXR1Q6PIV2 292 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 NBPF11Q86T75 865 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 ZSCAN31Q96LW9 406 aaPredicted RBP9.46□□□□□ -0.9
CSDE1-214ENST00000530886 MPHOSPH8Q99549 860 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
CSDE1-214ENST00000530886 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 TUBB4BP68371 445 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 STX1AQ16623 288 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 LONRF2Q1L5Z9 754 aa9.46□□□□□ -0.9
CSDE1-214ENST00000530886 ANKRD33BA6NCL7 494 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 DIAPH1O60610 1272 aaKnown RBP9.45□□□□□ -0.9
CSDE1-214ENST00000530886 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 EVC2Q86UK5 1308 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 EIF3JO75822 258 aaKnown RBP9.45□□□□□ -0.9
CSDE1-214ENST00000530886 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-214ENST00000530886 HNRNPH1P31943 449 aaKnown RBP9.45□□□□□ -0.9
CSDE1-214ENST00000530886 IL13P35225 146 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 ZKSCAN8Q15776 578 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-214ENST00000530886 CAMK4Q16566 473 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 DHX40Q8IX18 779 aaKnown RBP9.45□□□□□ -0.9
CSDE1-214ENST00000530886 FAM71BQ8TC56 605 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 CCDC34Q96HJ3 373 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 MEIS3Q99687 375 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 GGNBP2Q9H3C7 697 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 RAB21Q9UL25 225 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
CSDE1-214ENST00000530886 CRB1P82279 1406 aa9.44□□□□□ -0.9
CSDE1-214ENST00000530886 TMCO5BA8MYB1 307 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms