RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 UBAP2LQ14157 1087 aaKnown RBP6.53□□□□□ -1.36
SVIP-203ENST00000529848 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
SVIP-203ENST00000529848 KRT25Q7Z3Z0 450 aa6.53□□□□□ -1.36
SVIP-203ENST00000529848 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
SVIP-203ENST00000529848 GTPBP3Q969Y2 492 aaKnown RBP6.53□□□□□ -1.36
SVIP-203ENST00000529848 ZNF775Q96BV0 537 aaPredicted RBP6.53□□□□□ -1.36
SVIP-203ENST00000529848 ABHD17AQ96GS6 310 aa6.53□□□□□ -1.36
SVIP-203ENST00000529848 TRERF1Q96PN7 1200 aa6.53□□□□□ -1.36
SVIP-203ENST00000529848 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
SVIP-203ENST00000529848 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
SVIP-203ENST00000529848 ATXN7L1Q9ULK2 861 aaPredicted RBP6.53□□□□□ -1.36
SVIP-203ENST00000529848 PPFIA3O75145 1194 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 SASH3O75995 380 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 PMEPA1Q969W9 287 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 SETDB2Q96T68 719 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 ZFYVE28Q9HCC9 887 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 STRN4Q9NRL3 753 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 NDFIP2Q9NV92 336 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 KIAA1522Q9P206 1035 aaPredicted RBP6.52□□□□□ -1.37
SVIP-203ENST00000529848 PARP2Q9UGN5 583 aa6.52□□□□□ -1.37
SVIP-203ENST00000529848 RARAP10276 462 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 CD33P20138 364 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 PSMD2Q13200 908 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 NEUROD1Q13562 356 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 CFHR5Q9BXR6 569 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 GSX2Q9BZM3 304 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 EFCC1Q9HA90 598 aa6.51□□□□□ -1.37
SVIP-203ENST00000529848 PHF20L1A8MW92 1017 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 FGFR3P22607 806 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 CES1P23141 567 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 VAMP1P23763 118 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 TARSP26639 723 aaKnown RBP6.5□□□□□ -1.37
SVIP-203ENST00000529848 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 C1orf127Q8N9H9 656 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 BHMTQ93088 406 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 FRMD6Q96NE9 622 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 NLRP2Q9NX02 1062 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 SPG7Q9UQ90 795 aa6.5□□□□□ -1.37
SVIP-203ENST00000529848 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.5□□□□□ -1.37
SVIP-203ENST00000529848 GPR25O00155 361 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 EREGO14944 169 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 SORBS3O60504 671 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 NFKB1P19838 968 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 GNA15P30679 374 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 DAB2P98082 770 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 USPL1Q5W0Q7 1092 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 TMC4Q7Z404 712 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 FAM161BQ96MY7 647 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 VTI1BQ9UEU0 232 aa6.49□□□□□ -1.37
SVIP-203ENST00000529848 MMP20O60882 483 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 POLR3DP05423 398 aaPredicted RBP6.48□□□□□ -1.37
SVIP-203ENST00000529848 PSAPP07602 524 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 TSNAXIP1Q2TAA8 658 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 FAM182BQ5T319 152 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 RAB44Q7Z6P3 723 aaPredicted RBP6.48□□□□□ -1.37
SVIP-203ENST00000529848 SLC30A3Q99726 388 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 CHRDQ9H2X0 955 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 NPHS2Q9NP85 383 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 RNF19AQ9NV58 838 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 PRR12Q9ULL5 1215 aa6.48□□□□□ -1.37
SVIP-203ENST00000529848 GADD45BO75293 160 aaPredicted RBP6.47□□□□□ -1.37
SVIP-203ENST00000529848 VEGFBP49765 207 aa6.47□□□□□ -1.37
SVIP-203ENST00000529848 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
SVIP-203ENST00000529848 GRIN2CQ14957 1233 aa6.47□□□□□ -1.37
SVIP-203ENST00000529848 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.47□□□□□ -1.37
SVIP-203ENST00000529848 GALNT12Q8IXK2 581 aa6.47□□□□□ -1.37
SVIP-203ENST00000529848 OR13H1Q8NG92 308 aa6.47□□□□□ -1.37
SVIP-203ENST00000529848 NANOS1Q8WY41 292 aaKnown RBP6.47□□□□□ -1.37
SVIP-203ENST00000529848 ZFATQ9P243 1243 aa6.47□□□□□ -1.37
SVIP-203ENST00000529848 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
SVIP-203ENST00000529848 GIPC1O14908 333 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 RECKO95980 971 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 BMP4P12644 408 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 EDN3P14138 238 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 EIF4BP23588 611 aaKnown RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 SOX18P35713 384 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 PLAURQ03405 335 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 TLR7Q9NYK1 1049 aaKnown RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 NXF1Q9UBU9 619 aaKnown RBP6.46□□□□□ -1.38
SVIP-203ENST00000529848 HCN2Q9UL51 889 aa6.46□□□□□ -1.38
SVIP-203ENST00000529848 MAP3K6O95382 1288 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 MX2P20592 715 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 IRS1P35568 1242 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 CTBSQ01459 385 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 HYAL2Q12891 473 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 NFX1Q12986 1120 aaKnown RBP6.45□□□□□ -1.38
SVIP-203ENST00000529848 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 NCAPG2Q86XI2 1143 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 C12orf49Q9H741 205 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 AK5Q9Y6K8 562 aa6.45□□□□□ -1.38
SVIP-203ENST00000529848 TCF3P15923 654 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms