RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
SVIP-203ENST00000529848 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
SVIP-203ENST00000529848 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
SVIP-203ENST00000529848 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
SVIP-203ENST00000529848 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
SVIP-203ENST00000529848 FOXD1Q16676 465 aa14.32□□□□□ -0.12
SVIP-203ENST00000529848 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
SVIP-203ENST00000529848 ADRA2BP18089 450 aa13.74□□□□□ -0.21
SVIP-203ENST00000529848 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
SVIP-203ENST00000529848 MSH5O43196 834 aa13.1□□□□□ -0.31
SVIP-203ENST00000529848 KCNA4P22459 653 aa12.76□□□□□ -0.37
SVIP-203ENST00000529848 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
SVIP-203ENST00000529848 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
SVIP-203ENST00000529848 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
SVIP-203ENST00000529848 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
SVIP-203ENST00000529848 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
SVIP-203ENST00000529848 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.45
SVIP-203ENST00000529848 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
SVIP-203ENST00000529848 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
SVIP-203ENST00000529848 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
SVIP-203ENST00000529848 POTEDQ86YR6 584 aa12.17□□□□□ -0.46
SVIP-203ENST00000529848 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
SVIP-203ENST00000529848 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
SVIP-203ENST00000529848 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
SVIP-203ENST00000529848 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
SVIP-203ENST00000529848 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
SVIP-203ENST00000529848 ZBTB22O15209 634 aa11.71□□□□□ -0.53
SVIP-203ENST00000529848 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
SVIP-203ENST00000529848 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
SVIP-203ENST00000529848 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
SVIP-203ENST00000529848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.59
SVIP-203ENST00000529848 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
SVIP-203ENST00000529848 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
SVIP-203ENST00000529848 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
SVIP-203ENST00000529848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
SVIP-203ENST00000529848 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
SVIP-203ENST00000529848 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
SVIP-203ENST00000529848 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
SVIP-203ENST00000529848 CACNB1Q02641 598 aaPredicted RBP11.02□□□□□ -0.65
SVIP-203ENST00000529848 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
SVIP-203ENST00000529848 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
SVIP-203ENST00000529848 APLP2Q06481 763 aa10.97□□□□□ -0.65
SVIP-203ENST00000529848 CAPN15O75808 1086 aa10.86□□□□□ -0.67
SVIP-203ENST00000529848 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
SVIP-203ENST00000529848 FKBP8Q14318 412 aa10.82□□□□□ -0.68
SVIP-203ENST00000529848 ZNF219Q9P2Y4 722 aaPredicted RBP10.8□□□□□ -0.68
SVIP-203ENST00000529848 DSG3P32926 999 aa10.74□□□□□ -0.69
SVIP-203ENST00000529848 ABCB7O75027 752 aa10.71□□□□□ -0.69
SVIP-203ENST00000529848 POLA2Q14181 598 aa10.64□□□□□ -0.71
SVIP-203ENST00000529848 FBLN2P98095 1184 aa10.58□□□□□ -0.72
SVIP-203ENST00000529848 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
SVIP-203ENST00000529848 SPDYE4A6NLX3 237 aa10.49□□□□□ -0.73
SVIP-203ENST00000529848 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
SVIP-203ENST00000529848 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
SVIP-203ENST00000529848 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
SVIP-203ENST00000529848 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
SVIP-203ENST00000529848 PROM2Q8N271 834 aa10.31□□□□□ -0.76
SVIP-203ENST00000529848 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
SVIP-203ENST00000529848 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
SVIP-203ENST00000529848 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
SVIP-203ENST00000529848 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
SVIP-203ENST00000529848 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
SVIP-203ENST00000529848 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
SVIP-203ENST00000529848 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
SVIP-203ENST00000529848 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
SVIP-203ENST00000529848 PABPN1Q86U42 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
SVIP-203ENST00000529848 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
SVIP-203ENST00000529848 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
SVIP-203ENST00000529848 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
SVIP-203ENST00000529848 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
SVIP-203ENST00000529848 KLHL34Q8N239 644 aa9.98□□□□□ -0.81
SVIP-203ENST00000529848 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
SVIP-203ENST00000529848 SLC24A1O60721 1099 aa9.94□□□□□ -0.82
SVIP-203ENST00000529848 MIER1Q8N108 512 aa9.93□□□□□ -0.82
SVIP-203ENST00000529848 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
SVIP-203ENST00000529848 SPOCK2Q92563 424 aa9.91□□□□□ -0.82
SVIP-203ENST00000529848 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
SVIP-203ENST00000529848 ZBTB47Q9UFB7 747 aaPredicted RBP9.85□□□□□ -0.83
SVIP-203ENST00000529848 DCAF8L2P0C7V8 631 aa9.83□□□□□ -0.84
SVIP-203ENST00000529848 PKD2Q13563 968 aa9.83□□□□□ -0.84
SVIP-203ENST00000529848 SPDYE1Q8NFV5 336 aaPredicted RBP9.83□□□□□ -0.84
SVIP-203ENST00000529848 CLEC11AQ9Y240 323 aa9.82□□□□□ -0.84
SVIP-203ENST00000529848 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
SVIP-203ENST00000529848 ECM2O94769 699 aaPredicted RBP9.76□□□□□ -0.85
SVIP-203ENST00000529848 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
SVIP-203ENST00000529848 CIZ1Q9ULV3 898 aaPredicted RBP9.72□□□□□ -0.85
SVIP-203ENST00000529848 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
SVIP-203ENST00000529848 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
SVIP-203ENST00000529848 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
SVIP-203ENST00000529848 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
SVIP-203ENST00000529848 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
SVIP-203ENST00000529848 GSE1Q14687 1217 aa9.63□□□□□ -0.87
SVIP-203ENST00000529848 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
SVIP-203ENST00000529848 RGL2O15211 777 aa9.62□□□□□ -0.87
SVIP-203ENST00000529848 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
SVIP-203ENST00000529848 NUBP1P53384 320 aa9.59□□□□□ -0.87
SVIP-203ENST00000529848 POTEHQ6S545 545 aa9.59□□□□□ -0.87
SVIP-203ENST00000529848 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
SVIP-203ENST00000529848 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
SVIP-203ENST00000529848 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms