RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 ALDH16A1Q8IZ83 802 aa10.25□□□□□ -0.77
SPIDR-215ENST00000521798 MYOM3Q5VTT5 1437 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 CAMSAP2Q08AD1 1489 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 HECW2Q9P2P5 1572 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 DNAJA1P31689 397 aaKnown RBP10.24□□□□□ -0.77
SPIDR-215ENST00000521798 PLA2G2CQ5R387 149 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 SH3PXD2AQ5TCZ1 1133 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 ZDHHC1Q8WTX9 485 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 ESYT1Q9BSJ8 1104 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 DDX41Q9UJV9 622 aaKnown RBP10.24□□□□□ -0.77
SPIDR-215ENST00000521798 TLL2Q9Y6L7 1015 aa10.24□□□□□ -0.77
SPIDR-215ENST00000521798 EIF1AYO14602 144 aaKnown RBP10.23□□□□□ -0.77
SPIDR-215ENST00000521798 ADH1CP00326 375 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 PCSK2P16519 638 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 NOS2P35228 1153 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 NR5A1Q13285 461 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 ORC1Q13415 861 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 ZNF654Q8IZM8 581 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 ZNF295-AS1Q8N0V1 137 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 CNKSR1Q969H4 720 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 IFT43Q96FT9 208 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
SPIDR-215ENST00000521798 DNAJC25Q9H1X3 360 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 SPG7Q9UQ90 795 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 SIGLEC1Q9BZZ2 1709 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 MIA2Q96PC5 1412 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 ATP10AO60312 1499 aa10.23□□□□□ -0.77
SPIDR-215ENST00000521798 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 NEFLP07196 543 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 RPIAP49247 311 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 PTPN5P54829 565 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 PTPN12Q05209 780 aaKnown RBP10.22□□□□□ -0.77
SPIDR-215ENST00000521798 RC3H1Q5TC82 1133 aaKnown RBP10.22□□□□□ -0.77
SPIDR-215ENST00000521798 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 KLK14Q9P0G3 267 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 ZNF232Q9UNY5 417 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 INPP5FQ9Y2H2 1132 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 TMA7Q9Y2S6 64 aaKnown RBP10.22□□□□□ -0.77
SPIDR-215ENST00000521798 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 ABCA6Q8N139 1617 aa10.22□□□□□ -0.77
SPIDR-215ENST00000521798 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.77
SPIDR-215ENST00000521798 ANKRD62A6NC57 917 aa10.21□□□□□ -0.77
SPIDR-215ENST00000521798 EIF4BP23588 611 aaKnown RBP10.21□□□□□ -0.77
SPIDR-215ENST00000521798 RACK1P63244 317 aaKnown RBP10.21□□□□□ -0.77
SPIDR-215ENST00000521798 ARID5AQ03989 594 aa10.21□□□□□ -0.77
SPIDR-215ENST00000521798 CCDC144BQ3MJ40 725 aa10.21□□□□□ -0.77
SPIDR-215ENST00000521798 ZNF394Q53GI3 561 aa10.21□□□□□ -0.77
SPIDR-215ENST00000521798 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.77
SPIDR-215ENST00000521798 HCN4Q9Y3Q4 1203 aa10.21□□□□□ -0.77
SPIDR-215ENST00000521798 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
SPIDR-215ENST00000521798 RBL2Q08999 1139 aa10.2□□□□□ -0.78
SPIDR-215ENST00000521798 ARID4BQ4LE39 1312 aaPredicted RBP10.2□□□□□ -0.78
SPIDR-215ENST00000521798 CCDC141Q6ZP82 1450 aa10.2□□□□□ -0.78
SPIDR-215ENST00000521798 ANKRD13AQ8IZ07 590 aa10.2□□□□□ -0.78
SPIDR-215ENST00000521798 L3MBTL2Q969R5 705 aa10.2□□□□□ -0.78
SPIDR-215ENST00000521798 NUDT16Q96DE0 195 aaKnown RBP10.2□□□□□ -0.78
SPIDR-215ENST00000521798 INO80Q9ULG1 1556 aaPredicted RBP10.2□□□□□ -0.78
SPIDR-215ENST00000521798 PCDHGB7Q9Y5F8 929 aa10.2□□□□□ -0.78
SPIDR-215ENST00000521798 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 ATP7AQ04656 1500 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 FGD6Q6ZV73 1430 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 OPLAHO14841 1288 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 CLN3Q13286 438 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 HS2ST1Q7LGA3 356 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 USP48Q86UV5 1035 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 GPR152Q8TDT2 470 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 PHACTR1Q9C0D0 580 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
SPIDR-215ENST00000521798 CABP1Q9NZU7 370 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 BCORL1Q5H9F3 1711 aa10.19□□□□□ -0.78
SPIDR-215ENST00000521798 ARHGEF5Q12774 1597 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 SIAH2O43255 324 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 RPLP1P05386 114 aaKnown RBP10.18□□□□□ -0.78
SPIDR-215ENST00000521798 ADH1AP07327 375 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 NR3C2P08235 984 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 TREML1Q86YW5 311 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 GGNBP2Q9H3C7 697 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 SRA1Q9HD15 236 aaKnown RBP10.18□□□□□ -0.78
SPIDR-215ENST00000521798 FAM13BQ9NYF5 915 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 ADAMTSL3P82987 1691 aa10.18□□□□□ -0.78
SPIDR-215ENST00000521798 TCOF1Q13428 1488 aaKnown RBP10.17□□□□□ -0.78
SPIDR-215ENST00000521798 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
SPIDR-215ENST00000521798 TLDC2A0PJX2 215 aa10.17□□□□□ -0.78
SPIDR-215ENST00000521798 CPNE3O75131 537 aaKnown RBP10.17□□□□□ -0.78
SPIDR-215ENST00000521798 LHX8Q68G74 356 aa10.17□□□□□ -0.78
SPIDR-215ENST00000521798 C12orf49Q9H741 205 aa10.17□□□□□ -0.78
SPIDR-215ENST00000521798 PTPN23Q9H3S7 1636 aa10.17□□□□□ -0.78
SPIDR-215ENST00000521798 CENPCQ03188 943 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 C8orf34Q49A92 452 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 SOGA3Q5TF21 947 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 C1orf53Q5VUE5 145 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
SPIDR-215ENST00000521798 TTC16Q8NEE8 873 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 PARP3Q9Y6F1 533 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 AGLP35573 1532 aa10.16□□□□□ -0.78
SPIDR-215ENST00000521798 USP31Q70CQ4 1352 aa10.15□□□□□ -0.78
SPIDR-215ENST00000521798 PLXNC1O60486 1568 aa10.15□□□□□ -0.78
SPIDR-215ENST00000521798 GIPC1O14908 333 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms