RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 VSIG8P0DPA2 414 aa9.25□□□□□ -0.93
CHD1-206ENST00000511067 DUSP9Q99956 384 aaKnown RBP9.25□□□□□ -0.93
CHD1-206ENST00000511067 IGSF5Q9NSI5 407 aa9.25□□□□□ -0.93
CHD1-206ENST00000511067 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
CHD1-206ENST00000511067 MRPL58Q14197 206 aaKnown RBP9.24□□□□□ -0.93
CHD1-206ENST00000511067 TMC4Q7Z404 712 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 NLRP13Q86W25 1043 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 ZSCAN1Q8NBB4 408 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 FRMD6Q96NE9 622 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 EFCC1Q9HA90 598 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
CHD1-206ENST00000511067 ITGA6P23229 1130 aa9.23□□□□□ -0.93
CHD1-206ENST00000511067 DAB2P98082 770 aa9.23□□□□□ -0.93
CHD1-206ENST00000511067 TNP2Q05952 138 aa9.23□□□□□ -0.93
CHD1-206ENST00000511067 CFHR5Q9BXR6 569 aa9.23□□□□□ -0.93
CHD1-206ENST00000511067 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
CHD1-206ENST00000511067 PHACTR2O75167 634 aa9.22□□□□□ -0.93
CHD1-206ENST00000511067 DBN1Q16643 649 aa9.22□□□□□ -0.93
CHD1-206ENST00000511067 PMEPA1Q969W9 287 aa9.22□□□□□ -0.93
CHD1-206ENST00000511067 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
CHD1-206ENST00000511067 ZFYVE28Q9HCC9 887 aa9.22□□□□□ -0.93
CHD1-206ENST00000511067 ABI2Q9NYB9 513 aaPredicted RBP9.22□□□□□ -0.93
CHD1-206ENST00000511067 TMEM63CQ9P1W3 806 aa9.22□□□□□ -0.93
CHD1-206ENST00000511067 FOXD3Q9UJU5 478 aaPredicted RBP9.22□□□□□ -0.93
CHD1-206ENST00000511067 DCDC2BA2VCK2 349 aa9.21□□□□□ -0.94
CHD1-206ENST00000511067 KHNYNO15037 678 aaKnown RBP9.21□□□□□ -0.94
CHD1-206ENST00000511067 MAPTP10636 758 aaKnown RBP9.21□□□□□ -0.94
CHD1-206ENST00000511067 GNA15P30679 374 aa9.21□□□□□ -0.94
CHD1-206ENST00000511067 SFSWAPQ12872 951 aaKnown RBP9.21□□□□□ -0.94
CHD1-206ENST00000511067 CCINQ13939 588 aa9.21□□□□□ -0.94
CHD1-206ENST00000511067 MRS2Q9HD23 443 aa9.21□□□□□ -0.94
CHD1-206ENST00000511067 CUEDC1Q9NWM3 386 aaPredicted RBP9.21□□□□□ -0.94
CHD1-206ENST00000511067 ATXN7L1Q9ULK2 861 aaPredicted RBP9.21□□□□□ -0.94
CHD1-206ENST00000511067 BNIP3LO60238 219 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 RECKO95980 971 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 PSMD2Q13200 908 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 SETDB2Q96T68 719 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 GSX2Q9BZM3 304 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 MARK1Q9P0L2 795 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 PHF24Q9UPV7 400 aa9.2□□□□□ -0.94
CHD1-206ENST00000511067 GIPC1O14908 333 aa9.19□□□□□ -0.94
CHD1-206ENST00000511067 SORBS3O60504 671 aa9.19□□□□□ -0.94
CHD1-206ENST00000511067 FAM182BQ5T319 152 aa9.19□□□□□ -0.94
CHD1-206ENST00000511067 TTC39BQ5VTQ0 682 aaPredicted RBP9.19□□□□□ -0.94
CHD1-206ENST00000511067 CCDC74AQ96AQ1 378 aa9.19□□□□□ -0.94
CHD1-206ENST00000511067 CHRDQ9H2X0 955 aa9.19□□□□□ -0.94
CHD1-206ENST00000511067 SPG7Q9UQ90 795 aa9.19□□□□□ -0.94
CHD1-206ENST00000511067 TCF3P15923 654 aa9.18□□□□□ -0.94
CHD1-206ENST00000511067 ABHD17AQ96GS6 310 aa9.18□□□□□ -0.94
CHD1-206ENST00000511067 MAP3K6O95382 1288 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 FOXR1Q6PIV2 292 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 GALNT12Q8IXK2 581 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 STRN4Q9NRL3 753 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 CNTN3Q9P232 1028 aa9.17□□□□□ -0.94
CHD1-206ENST00000511067 SASH3O75995 380 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 HOXD8P13378 290 aaPredicted RBP9.16□□□□□ -0.94
CHD1-206ENST00000511067 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
CHD1-206ENST00000511067 SOX18P35713 384 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 TSNAXIP1Q2TAA8 658 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 C1orf127Q8N9H9 656 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 OR13H1Q8NG92 308 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 GTPBP3Q969Y2 492 aaKnown RBP9.16□□□□□ -0.94
CHD1-206ENST00000511067 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 NLRP2Q9NX02 1062 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 VTI1BQ9UEU0 232 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.16□□□□□ -0.94
CHD1-206ENST00000511067 AK5Q9Y6K8 562 aa9.16□□□□□ -0.94
CHD1-206ENST00000511067 CDC14CA4D256 554 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 EREGO14944 169 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 RARAP10276 462 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 FGFR3P22607 806 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 CES1P23141 567 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 NEUROD1Q13562 356 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD1-206ENST00000511067 NANOS1Q8WY41 292 aaKnown RBP9.15□□□□□ -0.94
CHD1-206ENST00000511067 FAM161BQ96MY7 647 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 HCN2Q9UL51 889 aa9.15□□□□□ -0.94
CHD1-206ENST00000511067 PHF20L1A8MW92 1017 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 SCAMP3O14828 347 aaKnown RBP9.14□□□□□ -0.95
CHD1-206ENST00000511067 MMP20O60882 483 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 EDN3P14138 238 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 NFKB1P19838 968 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 TARSP26639 723 aaKnown RBP9.14□□□□□ -0.95
CHD1-206ENST00000511067 SV2AQ7L0J3 742 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 VWA5B2Q8N398 1253 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 GPR161Q8N6U8 529 aaKnown RBP9.14□□□□□ -0.95
CHD1-206ENST00000511067 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 ZFATQ9P243 1243 aa9.14□□□□□ -0.95
CHD1-206ENST00000511067 CD33P20138 364 aa9.13□□□□□ -0.95
CHD1-206ENST00000511067 EIF4BP23588 611 aaKnown RBP9.13□□□□□ -0.95
CHD1-206ENST00000511067 KRT25Q7Z3Z0 450 aa9.13□□□□□ -0.95
CHD1-206ENST00000511067 CRELD1Q96HD1 420 aa9.13□□□□□ -0.95
CHD1-206ENST00000511067 C12orf49Q9H741 205 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms