RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 CEP63Q96MT8 703 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 CRISPLD1Q9H336 500 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 ELP3Q9H9T3 547 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 METTL5Q9NRN9 209 aaKnown RBP6.65□□□□□ -1.34
SMAD1-208ENST00000510948 FOXD3Q9UJU5 478 aaPredicted RBP6.65□□□□□ -1.34
SMAD1-208ENST00000510948 DYRK1BQ9Y463 629 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 POLA1P09884 1462 aaPredicted RBP6.65□□□□□ -1.35
SMAD1-208ENST00000510948 LOC105371045A0A1W2PR82 267 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 GIPC1O14908 333 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 EGFRP00533 1210 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 BMP1P13497 986 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-208ENST00000510948 TYRO3Q06418 890 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 TRIP4Q15650 581 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-208ENST00000510948 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMAD1-208ENST00000510948 TRIM46Q7Z4K8 759 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 NLRP8Q86W28 1048 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 PGBD3Q8N328 593 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 RNF34Q969K3 372 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 CCDC74AQ96AQ1 378 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 ZFP42Q96MM3 310 aa6.64□□□□□ -1.35
SMAD1-208ENST00000510948 KIF21BO75037 1637 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 PHACTR2O75167 634 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 XYLBO75191 536 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 EIF4BP23588 611 aaKnown RBP6.63□□□□□ -1.35
SMAD1-208ENST00000510948 GRNP28799 593 aaKnown RBP6.63□□□□□ -1.35
SMAD1-208ENST00000510948 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 METTL16Q86W50 562 aaKnown RBP6.63□□□□□ -1.35
SMAD1-208ENST00000510948 ABCA5Q8WWZ7 1642 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 RUBCNLQ9H714 662 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 GPAMQ9HCL2 828 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 NLRP2Q9NX02 1062 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
SMAD1-208ENST00000510948 TARBP1Q13395 1621 aaKnown RBP6.62□□□□□ -1.35
SMAD1-208ENST00000510948 SOGA1O94964 1423 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 DGAT1O75907 488 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 ZNF76P36508 570 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 FANCCQ00597 558 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 NAALADL2Q58DX5 795 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 NLRP13Q86W25 1043 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 NT5DC4Q86YG4 428 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 EPS8L3Q8TE67 593 aaKnown RBP6.62□□□□□ -1.35
SMAD1-208ENST00000510948 PMEPA1Q969W9 287 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 GAS2L1Q99501 681 aaPredicted RBP6.62□□□□□ -1.35
SMAD1-208ENST00000510948 BRD7Q9NPI1 651 aa6.62□□□□□ -1.35
SMAD1-208ENST00000510948 ABCA10Q8WWZ4 1543 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 ERCC6Q03468 1493 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 CTSHP09668 335 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 RAD51AP2Q09MP3 1159 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.61□□□□□ -1.35
SMAD1-208ENST00000510948 EFHC2Q5JST6 749 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 C1orf127Q8N9H9 656 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 CRELD1Q96HD1 420 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 ZCCHC2Q9C0B9 1178 aaKnown RBP6.61□□□□□ -1.35
SMAD1-208ENST00000510948 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
SMAD1-208ENST00000510948 DNMT3LQ9UJW3 386 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 PBRM1Q86U86 1689 aa6.61□□□□□ -1.35
SMAD1-208ENST00000510948 RUSC2Q8N2Y8 1516 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 AXIN1O15169 862 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 KCNQ4P56696 695 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 LBRQ14739 615 aaKnown RBP6.6□□□□□ -1.35
SMAD1-208ENST00000510948 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
SMAD1-208ENST00000510948 PI16Q6UXB8 463 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 DRC1Q96MC2 740 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 OSBPL7Q9BZF2 842 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 CHRDQ9H2X0 955 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 C12orf49Q9H741 205 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 CNTN3Q9P232 1028 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 KCNH4Q9UQ05 1017 aa6.6□□□□□ -1.35
SMAD1-208ENST00000510948 CUL7Q14999 1698 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 POLR3DP05423 398 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-208ENST00000510948 IRS1P35568 1242 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 FIGNL1Q6PIW4 674 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 GALNT12Q8IXK2 581 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 CRIPAKQ8N1N5 446 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 SREK1Q8WXA9 508 aaKnown RBP6.59□□□□□ -1.35
SMAD1-208ENST00000510948 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 ERICH3Q5RHP9 1530 aa6.59□□□□□ -1.35
SMAD1-208ENST00000510948 USP31Q70CQ4 1352 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 SENP3-EIF4A1A0A087X0R7 540 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 EREGO14944 169 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 ATXN7O15265 892 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-208ENST00000510948 MAN1A2O60476 641 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 CES1P23141 567 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 SRCIN1Q9C0H9 1055 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 NPHS2Q9NP85 383 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 FAM8A1Q9UBU6 413 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 PCDHGC4Q9Y5F7 938 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 CUX2O14529 1486 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 KIF27Q86VH2 1401 aa6.58□□□□□ -1.36
SMAD1-208ENST00000510948 EIF4G3O43432 1585 aaKnown RBP6.57□□□□□ -1.36
SMAD1-208ENST00000510948 GFRA3O60609 400 aa6.57□□□□□ -1.36
SMAD1-208ENST00000510948 SASH3O75995 380 aa6.57□□□□□ -1.36
SMAD1-208ENST00000510948 FAM157BP0CG42 384 aa6.57□□□□□ -1.36
SMAD1-208ENST00000510948 SFSWAPQ12872 951 aaKnown RBP6.57□□□□□ -1.36
SMAD1-208ENST00000510948 CCINQ13939 588 aa6.57□□□□□ -1.36
SMAD1-208ENST00000510948 TAF1CQ15572 869 aaPredicted RBP6.57□□□□□ -1.36
SMAD1-208ENST00000510948 NXPE4Q6UWF7 544 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms